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L3_060_256G1_scaffold_55

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Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_55_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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144..1628
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38716.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sulfatase
L3_060_256G1_scaffold_55_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1690..3567
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38715.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycoside hydrolase family protein
L3_060_256G1_scaffold_55_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3564..6113
DNA (2550bp) protein (850aa)
Beta-mannosidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDK4_9FIRM
Beta-mannosidase {ECO:0000313|EMBL:EGN38714.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
beta-mannosidase
L3_060_256G1_scaffold_55_4
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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6336..7715
DNA (1380bp) protein (460aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JKB1_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EOS31582.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
two-component sensor histidine kinase
L3_060_256G1_scaffold_55_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7848..9323
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38712.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sulfatase
L3_060_256G1_scaffold_55_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9505..10170)
DNA (666bp) protein (222aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BCR2_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI69608.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
helix-turn-helix domain-containing protein
L3_060_256G1_scaffold_55_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10363..10551
DNA (189bp) protein (63aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AUT6_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI69609.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
MerR family transcriptional regulator
L3_060_256G1_scaffold_55_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10594..10959
DNA (366bp) protein (122aa)
Dinitrogenase iron-molybdenum cofactor n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CK43_9CLOT
Dinitrogenase iron-molybdenum cofactor {ECO:0000313|EMBL:ERI69607.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
dinitrogenase iron-molybdenum cofactor biosynthesis protein
L3_060_256G1_scaffold_55_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11075..11236
DNA (162bp) protein (54aa)
Rubredoxin n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDJ6_9FIRM
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
rd; rubredoxin
L3_060_256G1_scaffold_55_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11649..12584
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44058.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
binding-protein-dependent transport systems inner membrane component
L3_060_256G1_scaffold_55_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12584..13462
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44057.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sugar ABC transporter permease
L3_060_256G1_scaffold_55_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13616..15169
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44056.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
family 1 extracellular solute-binding protein
L3_060_256G1_scaffold_55_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15324..17873
DNA (2550bp) protein (850aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44055.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycoside hydrolase family protein
L3_060_256G1_scaffold_55_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17854..19725
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44054.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_55_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19753..20862
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44053.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
gntR; regulatory protein GntR
L3_060_256G1_scaffold_55_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20867..22189
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44052.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_55_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22186..22830)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38705.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_55_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22812..23363)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38704.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_060_256G1_scaffold_55_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23338..24672)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38703.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
phosphoadenosine phosphosulfate reductase
L3_060_256G1_scaffold_55_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24665..26104)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38702.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
helicase domain-containing protein
L3_060_256G1_scaffold_55_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26107..27300)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38701.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_060_256G1_scaffold_55_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28215..29057
DNA (843bp) protein (281aa)
Cof-like hydrolase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDI7_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EGN38696.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
HAD-superfamily hydrolase, subfamily IIB
L3_060_256G1_scaffold_55_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29106..31142
DNA (2037bp) protein (679aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDI6_9FIRM
L3_060_256G1_scaffold_55_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31186..31731)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38694.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_55_25
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31946..32533
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2KRI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPC05054.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
TetR family transcriptional regulator
L3_060_256G1_scaffold_55_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32721..36512
DNA (3792bp) protein (1264aa)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDI2_9FIRM
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EGN38689.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
phosphoribosylformylglycinamidine synthase
L3_060_256G1_scaffold_55_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36707..37909
DNA (1203bp) protein (401aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDI0_9FIRM
L3_060_256G1_scaffold_55_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37902..41099
DNA (3198bp) protein (1066aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDP2_9FIRM
L3_060_256G1_scaffold_55_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41105..41785
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38685.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_55_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


41898..43667
DNA (1770bp) protein (590aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDP1_9FIRM
Displaying items 1-30 of 107 in total

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