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L3_060_256G1_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_78_1
unknown

Not on your lists

comp(100..339)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_060_256G1_scaffold_78_2
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(356..805)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RX64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45388.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_060_256G1_scaffold_78_3
unknown

Not on your lists

1299..1490
DNA (192bp) protein (64aa)

This feature has no annotations

L3_060_256G1_scaffold_78_4
unknown

Not on your lists

comp(1903..2127)
DNA (225bp) protein (75aa)

This feature has no annotations

L3_060_256G1_scaffold_78_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

2306..2683
DNA (378bp) protein (126aa)
Transcriptional regulator PadR family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQF9_9FIRM
Transcriptional regulator PadR family {ECO:0000313|EMBL:CCY27032.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
PadR family transcriptional regulator
L3_060_256G1_scaffold_78_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

2680..3075
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HC08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27033.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_060_256G1_scaffold_78_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3065..3517
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0NC62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF42227.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_060_256G1_scaffold_78_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3675..6041
DNA (2367bp) protein (789aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Endonuclease MutS2 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H8_9FIRM
mutS2; MutS2 protein
L3_060_256G1_scaffold_78_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6350..6613
DNA (264bp) protein (88aa)
Phosphocarrier protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H7_9FIRM
Phosphocarrier protein {ECO:0000313|EMBL:EGJ48224.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
crh; HPr-like protein Crh
L3_060_256G1_scaffold_78_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6719..8542
DNA (1824bp) protein (608aa)
UvrABC system protein C n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H6_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
uvrC; UvrABC system protein C
L3_060_256G1_scaffold_78_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8576..9136
DNA (561bp) protein (187aa)
RsmD family RNA methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H5_9FIRM
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EGJ48222.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_060_256G1_scaffold_78_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9133..9630
DNA (498bp) protein (166aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H4_9FIRM
L3_060_256G1_scaffold_78_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9634..10164
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48220.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_060_256G1_scaffold_78_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10415..11383
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47065.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_060_256G1_scaffold_78_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11380..12183
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47066.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Mn/Zn ABC transporter ATPase
L3_060_256G1_scaffold_78_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12183..13028
DNA (846bp) protein (282aa)
Zinc transport system permease n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE21_9FIRM
Zinc transport system permease {ECO:0000313|EMBL:EGJ47067.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC-type transporter, integral membrane subunit
L3_060_256G1_scaffold_78_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13074..13286)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47509.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_060_256G1_scaffold_78_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13329..14510)
DNA (1182bp) protein (394aa)
Sporulation integral membrane protein YlbJ n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAY2_9FIRM
Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:EGJ47510.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative membrane protein
L3_060_256G1_scaffold_78_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14654..15379)
DNA (726bp) protein (242aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T8_9FIRM
glucosamine-6-phosphate deaminase
L3_060_256G1_scaffold_78_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15614..16453
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47120.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
RpiR family transcriptional regulator
L3_060_256G1_scaffold_78_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16579..17472
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46833.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
glycoside hydrolase family protein
L3_060_256G1_scaffold_78_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17542..18627)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46834.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_060_256G1_scaffold_78_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18812..19435
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47018.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_060_256G1_scaffold_78_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19432..20175
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47019.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
acyl-ACP thioesterase
L3_060_256G1_scaffold_78_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20284..21759
DNA (1476bp) protein (492aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDX4_9FIRM
L3_060_256G1_scaffold_78_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21908..23197)
DNA (1290bp) protein (430aa)
Uncharacterized protein {ECO:0000313|EMBL:EGJ48194.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_060_256G1_scaffold_78_27
unknown

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comp(23242..24213)
DNA (972bp) protein (324aa)

This feature has no annotations

L3_060_256G1_scaffold_78_28
unknown

Not on your lists

comp(24238..25479)
DNA (1242bp) protein (414aa)

This feature has no annotations

L3_060_256G1_scaffold_78_29
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(25502..26674)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J132_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43917.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L3_060_256G1_scaffold_78_30
unknown

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comp(26690..27517)
DNA (828bp) protein (276aa)

This feature has no annotations

Displaying items 1-30 of 116 in total

View Taxonomy