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L3_060_256G1_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_87_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..633
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7B2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG52778.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
peptidoglycan-binding lysin domain-containing protein
L3_060_256G1_scaffold_87_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(829..3783)
DNA (2955bp) protein (985aa)
PAS domain S-box protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFT2_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:EGN34637.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_87_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3780..5063)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34638.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC-type sugar transport system, periplasmic component
L3_060_256G1_scaffold_87_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5167..6789)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2KS81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPC05147.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
stage V sporulation protein AF
L3_060_256G1_scaffold_87_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6823..7149
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFT6_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
trxA; thioredoxin
L3_060_256G1_scaffold_87_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7187..8101
DNA (915bp) protein (305aa)
Thioredoxin-disulfide reductase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFT7_9FIRM
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EGN34642.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_87_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8166..9347)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34644.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
iron-containing alcohol dehydrogenase
L3_060_256G1_scaffold_87_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9386..10453)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34645.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Xaa-Pro dipeptidase
L3_060_256G1_scaffold_87_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10484..11797)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2LJK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPC05148.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_87_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11802..12629)
DNA (828bp) protein (276aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFU3_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN34648.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ugpE; sugar ABC transporter ATP-binding protein
L3_060_256G1_scaffold_87_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12641..13555)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34649.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ugpA; sugar ABC transporter ATP-binding protein
L3_060_256G1_scaffold_87_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13680..15002)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34650.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ugpB; sugar ABC superfamily ATP binding cassette transporter, binding protein
L3_060_256G1_scaffold_87_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15096..16073)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34651.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_87_14
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16192..17466)
DNA (1275bp) protein (425aa)
UPF0597 protein CcarbDRAFT_5404 n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q2Y5_9CLOT
UPF0597 protein CcarbDRAFT_5404 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
protein of unknown function DUF1063
L3_060_256G1_scaffold_87_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17842..19323)
DNA (1482bp) protein (494aa)
Arylsulfatase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BKJ0_9CLOT
Arylsulfatase {ECO:0000313|EMBL:ERI72333.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
sulfatase
L3_060_256G1_scaffold_87_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19441..21096)
DNA (1656bp) protein (552aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CSW1_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI72332.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
family 1 extracellular solute-binding protein
L3_060_256G1_scaffold_87_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21147..22049)
DNA (903bp) protein (301aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFV2_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN34657.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
binding-protein-dependent transport system inner membrane protein
L3_060_256G1_scaffold_87_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22062..22976)
DNA (915bp) protein (305aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BJC3_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI72330.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
sugar ABC transporter permease
L3_060_256G1_scaffold_87_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23143..24885)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34659.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
signal transduction histidine kinase LytS
L3_060_256G1_scaffold_87_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24851..25624)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34660.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
AraC family transcriptional regulator
L3_060_256G1_scaffold_87_21
unknown

Not on your lists

comp(25579..25794)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_060_256G1_scaffold_87_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25878..26117)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34662.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Phosphotransferase system, HPr-related proteins
L3_060_256G1_scaffold_87_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26255..27784)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34663.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
AraC family transcriptional regulator
L3_060_256G1_scaffold_87_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27765..29498)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34664.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
integral membrane sensor signal transduction histidine kinase
L3_060_256G1_scaffold_87_25
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29495..30736)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34665.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sugar ABC transporter periplasmic protein
L3_060_256G1_scaffold_87_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30910..32247)
DNA (1338bp) protein (446aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CYG8_9CLOT
L3_060_256G1_scaffold_87_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32502..33824)
DNA (1323bp) protein (441aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFW3_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:EGN34668.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_060_256G1_scaffold_87_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33966..34865
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34669.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
AraC family transcriptional regulator
L3_060_256G1_scaffold_87_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34876..35337)
DNA (462bp) protein (154aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine phosphatase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFW5_9FIRM
Protein-tyrosine phosphatase {ECO:0000313|EMBL:EGN34670.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_060_256G1_scaffold_87_30
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(35746..36333)
DNA (588bp) protein (196aa)
Hypothetical Cytosolic Protein n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P382_FUSNV
Hypothetical Cytosolic Protein {ECO:0000313|EMBL:EAA25090.1}; TaxID=209882 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. vincentii ATCC 49256.;"
hypothetical protein
Displaying items 1-30 of 93 in total

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