ggKbase home page

L3_060_256G1_scaffold_89

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_89_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

226..579
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY85139.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
yugI; general stress protein 13
L3_060_256G1_scaffold_89_2
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

595..1869
DNA (1275bp) protein (425aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLX5_9FIRM
L3_060_256G1_scaffold_89_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2015..2863
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BEU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ53284.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_060_256G1_scaffold_89_4
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3059..3970)
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77388.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
HTH-type transcriptional regulator
L3_060_256G1_scaffold_89_5
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4297..6927
DNA (2631bp) protein (877aa)
ppdK; Pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=4 Tax=Firmicutes RepID=E4LPZ9_9CLOT
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EHO19121.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_060_256G1_scaffold_89_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7367..7816
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AU05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ53279.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L3_060_256G1_scaffold_89_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8136..9029
DNA (894bp) protein (298aa)
Short-chain dehydrogenases of various substrate specificities n=2 Tax=Clostridiales RepID=D4M4P2_9FIRM
Short-chain dehydrogenases of various substrate specificities
Short-chain dehydrogenases of various substrate specificities {ECO:0000313|EMBL:CDC17696.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_060_256G1_scaffold_89_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9241..9450)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ53278.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L3_060_256G1_scaffold_89_9
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9450..9923)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BGL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20616.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_060_256G1_scaffold_89_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10020..10640)
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LPZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ58653.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Transcriptional regulator
L3_060_256G1_scaffold_89_11
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11083..12603
DNA (1521bp) protein (507aa)
ImpB/MucB/SamB family protein n=2 Tax=Firmicutes RepID=E4LPZ1_9CLOT
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:CDC83061.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L3_060_256G1_scaffold_89_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12616..13038
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BGL5_9FIRM
YolD-like family protein {ECO:0000313|EMBL:EQJ58650.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
YolD-like protein.
L3_060_256G1_scaffold_89_13
unknown

Not on your lists

13256..13405
DNA (150bp) protein (50aa)

This feature has no annotations

L3_060_256G1_scaffold_89_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13433..15697
DNA (2265bp) protein (755aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6UM62_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CDC83064.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
putative signaling protein
L3_060_256G1_scaffold_89_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15743..17680
DNA (1938bp) protein (646aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1ATZ9_9FIRM
Phosphohydrolase {ECO:0000313|EMBL:KGJ53272.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_060_256G1_scaffold_89_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18316..19431)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LPY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39294.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_060_256G1_scaffold_89_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19432..20016)
DNA (585bp) protein (195aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ53270.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Predicted membrane protein
L3_060_256G1_scaffold_89_18
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20009..20326)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77396.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
transcriptional regulator, PadR family
L3_060_256G1_scaffold_89_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20488..20916
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY85149.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
MarR family transcriptional regulator
L3_060_256G1_scaffold_89_20
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20909..21766
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77398.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
NmrA family transcriptional regulator
L3_060_256G1_scaffold_89_21
unknown

Not on your lists

21830..21967
DNA (138bp) protein (46aa)

This feature has no annotations

L3_060_256G1_scaffold_89_22
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21980..23125
DNA (1146bp) protein (382aa)
4Fe-4S binding domain protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SMR4_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFP61176.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
aldo/keto reductase
L3_060_256G1_scaffold_89_23
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23248..23976
DNA (729bp) protein (243aa)
Alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SLK4_9FIRM
Alkylhydroperoxidase AhpD family core domain protein {ECO:0000313|EMBL:EFP61553.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
pcaC; 4-carboxymuconolactone decarboxylase
L3_060_256G1_scaffold_89_24
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23990..24406
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SMR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP61177.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
L3_060_256G1_scaffold_89_25
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24491..25018
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VLY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY85152.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_060_256G1_scaffold_89_26
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25852..26907
DNA (1056bp) protein (352aa)
Site-specific recombinase, phage integrase family n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SNU9_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFP60873.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
Integrase
L3_060_256G1_scaffold_89_27
unknown

Not on your lists

27109..27309
DNA (201bp) protein (67aa)

This feature has no annotations

L3_060_256G1_scaffold_89_28
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27366..42455
DNA (15090bp) protein (5030aa)
BNR/Asp-box repeat protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SNV0_9FIRM
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EFP60874.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
hypothetical protein
L3_060_256G1_scaffold_89_29
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

42504..42848
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SNV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP60875.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
L3_060_256G1_scaffold_89_30
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

42976..43500
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SNV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP60876.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
Displaying items 1-30 of 87 in total

View Taxonomy