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L3_060_256G1_scaffold_96

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_96_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..510)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7B2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG52778.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
S-layer protein
L3_060_256G1_scaffold_96_2
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1192..1443
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NHE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ03570.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
putative dihydroxyacetone kinase
L3_060_256G1_scaffold_96_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1700..2074
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43023.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Copper chaperone
L3_060_256G1_scaffold_96_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2200..2457
DNA (258bp) protein (86aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5C0_9FIRM
L3_060_256G1_scaffold_96_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2499..2759
DNA (261bp) protein (87aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5C0_9FIRM
L3_060_256G1_scaffold_96_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3196..3969
DNA (774bp) protein (258aa)
FeS assembly ATPase SufC n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5B9_9FIRM
FeS assembly ATPase SufC {ECO:0000313|EMBL:EGN43021.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Iron-regulated ABC transporter ATPase subunit SufC
L3_060_256G1_scaffold_96_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3989..5395
DNA (1407bp) protein (469aa)
FeS assembly protein SufB n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5B8_9FIRM
FeS assembly protein SufB {ECO:0000313|EMBL:EGN43020.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Fe-S cluster assembly protein SufB
L3_060_256G1_scaffold_96_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5418..6533
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43019.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
L3_060_256G1_scaffold_96_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6526..7758
DNA (1233bp) protein (411aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Cysteine desulfurase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5B6_9FIRM
SufS subfamily cysteine desulfurase protein
L3_060_256G1_scaffold_96_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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7748..8179
DNA (432bp) protein (144aa)
NifU family SUF system FeS assembly protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5B5_9FIRM
NifU family SUF system FeS assembly protein {ECO:0000313|EMBL:EGN43017.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
nitrogen fixation protein NifU-like protein
L3_060_256G1_scaffold_96_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8224..8589)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43016.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Mn-dependent transcriptional regulator
L3_060_256G1_scaffold_96_12
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8811..9029
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NJT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04013.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
Fe2+ transport system protein A
L3_060_256G1_scaffold_96_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9050..9322
DNA (273bp) protein (91aa)
Ferrous iron transporter A n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5A7_9FIRM
Ferrous iron transporter A {ECO:0000313|EMBL:EGN43009.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
FeoA family protein
L3_060_256G1_scaffold_96_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9425..11623
DNA (2199bp) protein (733aa)
Ferrous iron transporter B n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5A6_9FIRM
Ferrous iron transporter B {ECO:0000313|EMBL:EGN43008.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ferrous iron transport protein B
L3_060_256G1_scaffold_96_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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11697..12233
DNA (537bp) protein (179aa)
Fur family transcriptional regulator, ferric uptake regulator n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5A5_9FIRM
Fur family transcriptional regulator, ferric uptake regulator {ECO:0000313|EMBL:EGN43007.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ferric uptake regulator family protein
L3_060_256G1_scaffold_96_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12512..12811
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UIK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD20877.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_060_256G1_scaffold_96_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13074..15149
DNA (2076bp) protein (692aa)
Heavy metal translocating P-type ATPase n=1 Tax=Clostridium sp. D5 RepID=F0YVG2_9CLOT
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EGB94882.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_060_256G1_scaffold_96_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15255..16388)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43006.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
GntR family transcriptional regulator with LacI sensor
L3_060_256G1_scaffold_96_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16796..17755
DNA (960bp) protein (320aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5A3_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN43005.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
binding-protein-dependent transport system inner membrane protein
L3_060_256G1_scaffold_96_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17768..18652
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43004.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
binding-protein-dependent transport systems inner membrane component
L3_060_256G1_scaffold_96_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18728..20527
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43003.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
family 1 extracellular solute-binding protein
L3_060_256G1_scaffold_96_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20652..22925
DNA (2274bp) protein (758aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43002.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_96_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22944..23810
DNA (867bp) protein (289aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Glycyl-radical enzyme activating protein family n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K599_9FIRM
Glycyl-radical enzyme activating protein family {ECO:0000313|EMBL:EGN43001.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_060_256G1_scaffold_96_24
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23819..26008
DNA (2190bp) protein (730aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K598_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43000.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
formate acetyltransferase 2
L3_060_256G1_scaffold_96_25
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26206..29049
DNA (2844bp) protein (948aa)
alpha-mannosidase (EC:3.2.1.24)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K596_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42998.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_060_256G1_scaffold_96_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29259..30497
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K595_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42997.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_060_256G1_scaffold_96_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30678..31451)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66304.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_060_256G1_scaffold_96_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31468..33279)
DNA (1812bp) protein (604aa)
HAMP domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AE27_9CLOT
HAMP domain protein {ECO:0000313|EMBL:EFC99905.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
histidine kinase
L3_060_256G1_scaffold_96_29
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33505..34416
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036E2553
Sugar ABC transporter permease {ECO:0000313|EMBL:KIL41474.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
binding-protein-dependent transport system inner membrane protein
L3_060_256G1_scaffold_96_30
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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34429..35304
DNA (876bp) protein (292aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EIX7_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDB00513.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
binding-protein-dependent transport systems inner membrane component
Displaying items 1-30 of 86 in total

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