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L3_060_256G1_scaffold_104

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_104_1
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(199..579)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=2 Tax=Firmicutes RepID=R6QGT8_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:CDC30066.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
RutC family protein
L3_060_256G1_scaffold_104_2
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

807..2396
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAL7_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
peptide chain release factor 3
L3_060_256G1_scaffold_104_3
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2441..2890)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6QAL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD62463.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
putative Xre family DNA-binding protein
L3_060_256G1_scaffold_104_4
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(2960..4000)
DNA (1041bp) protein (347aa)
ltaE; Low specificity L-threonine aldolase LtaE (EC:4.1.2.5)
Low specificity L-threonine aldolase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QGU2_9FIRM
Low specificity L-threonine aldolase {ECO:0000313|EMBL:CDC30071.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_256G1_scaffold_104_5
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4019..4456)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6Q2U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD62465.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_104_6
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(4605..6572)
DNA (1968bp) protein (656aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QGU6_9FIRM
L3_060_256G1_scaffold_104_7
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(6569..7156)
DNA (588bp) protein (196aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase n=2 Tax=Firmicutes RepID=R6R6N8_9FIRM
1-acyl-sn-glycerol-3-phosphate acyltransferase
L3_060_256G1_scaffold_104_8
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7168..7839)
DNA (672bp) protein (224aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Clostridium sp. CAG:505 RepID=R7ANS2_9CLOT
L3_060_256G1_scaffold_104_9
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(7854..9092)
DNA (1239bp) protein (413aa)
HI0933 family protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q2U5_9FIRM
HI0933 family protein {ECO:0000313|EMBL:CDC30080.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
flavoprotein, HI0933 family
L3_060_256G1_scaffold_104_10
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(9095..9742)
DNA (648bp) protein (216aa)
Fructose-2 6-bisphosphatase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QGV0_9FIRM
Fructose-2 6-bisphosphatase {ECO:0000313|EMBL:CDC30081.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
phosphoglycerate mutase
L3_060_256G1_scaffold_104_11
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

9933..10319
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6R6N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30082.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_256G1_scaffold_104_12
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(10538..11260)
DNA (723bp) protein (241aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
rluB; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22)
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q0M3_9FIRM
L3_060_256G1_scaffold_104_13
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(11326..12492)
DNA (1167bp) protein (389aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Firmicutes RepID=R6QH93_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDC30261.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_256G1_scaffold_104_14
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(12853..13410)
DNA (558bp) protein (186aa)
Segregation and condensation protein B n=2 Tax=Firmicutes RepID=R6Q0L8_9FIRM
Segregation and condensation protein B {ECO:0000256|HAMAP-Rule:MF_01804, ECO:0000256|SAAS:SAAS00086417}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
segregation and condensation protein B
L3_060_256G1_scaffold_104_15
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(13407..14171)
DNA (765bp) protein (255aa)
Segregation and condensation protein A n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QH89_9FIRM
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_256G1_scaffold_104_16
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14184..14798)
DNA (615bp) protein (205aa)
Peptidase M50 n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAH6_9CLOT
Peptidase M50 {ECO:0000313|EMBL:CDD62477.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
peptidase M50
L3_060_256G1_scaffold_104_17
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14988..15194
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6R754_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD62478.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
transcriptional regulator
L3_060_256G1_scaffold_104_18
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15191..15625
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6Q3B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD62479.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_104_19
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15640..16062
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BCH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD62480.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_104_20
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16121..17296)
DNA (1176bp) protein (392aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAM8_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDD62481.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_104_21
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17362..18051)
DNA (690bp) protein (230aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAD4_9CLOT
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
sugar fermentation stimulation protein
L3_060_256G1_scaffold_104_22
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18106..18702)
DNA (597bp) protein (199aa)
Rubrerythrin n=1 Tax=Clostridium sp. CAG:505 RepID=R7ANU1_9CLOT
Rubrerythrin {ECO:0000313|EMBL:CDD62483.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
rubrerythrin
L3_060_256G1_scaffold_104_23
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18828..19358
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD62484.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Protein of unknown function (DUF1393).
L3_060_256G1_scaffold_104_24
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(19401..20597)
DNA (1197bp) protein (399aa)
Small GTP-binding protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QAZ0_9FIRM
Small GTP-binding protein {ECO:0000313|EMBL:CDC30239.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
small GTP-binding protein
L3_060_256G1_scaffold_104_25
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20613..22031)
DNA (1419bp) protein (473aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Clostridium sp. CAG:505 RepID=R7BCH8_9CLOT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:CDD62486.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
biotin and thiamin synthesis associated protein
L3_060_256G1_scaffold_104_26
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22074..23135)
DNA (1062bp) protein (354aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAN2_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:CDD62487.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
radical SAM protein
L3_060_256G1_scaffold_104_27
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(23132..23398)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6QAY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30234.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_256G1_scaffold_104_28
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23674..25392)
DNA (1719bp) protein (573aa)
Collagen alpha-1(III) chain n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAD8_9CLOT
Collagen alpha-1(III) chain {ECO:0000313|EMBL:CDD62489.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_104_29
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25392..26318)
DNA (927bp) protein (309aa)
ATPase family n=2 Tax=Firmicutes RepID=R6R735_9FIRM
ATPase family {ECO:0000313|EMBL:CDD62490.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_104_30
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26738..26935
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=2 Tax=Firmicutes RepID=R6QH67_9FIRM
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CDD62491.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
sulfur carrier protein ThiS
Displaying items 1-30 of 106 in total

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