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L3_060_256G1_scaffold_113

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_113_1
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

392..832
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WM56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA04493.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_060_256G1_scaffold_113_2
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(994..3120)
DNA (2127bp) protein (709aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthase n=1 Tax=Blautia sp. CAG:257 RepID=R5WWS7_9FIRM
NAD+ synthase {ECO:0000313|EMBL:CDA04494.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L3_060_256G1_scaffold_113_3
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3185..4063)
DNA (879bp) protein (293aa)
33 kDa chaperonin n=1 Tax=Blautia sp. CAG:257 RepID=R5WWU7_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Disulfide bond chaperones of the HSP33 family
L3_060_256G1_scaffold_113_4
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4130..4891)
DNA (762bp) protein (254aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Blautia sp. CAG:257 RepID=R5X851_9FIRM
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CDA04501.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_060_256G1_scaffold_113_5
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5024..6106)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WM96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA04503.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_060_256G1_scaffold_113_6
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6265..8322)
DNA (2058bp) protein (686aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Blautia sp. CAG:257 RepID=R5WPN5_9FIRM
L3_060_256G1_scaffold_113_7
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8327..8647)
DNA (321bp) protein (107aa)
UPF0145 protein BN568_00146 n=1 Tax=Blautia sp. CAG:257 RepID=R5WWX3_9FIRM
UPF0145 protein BN568_00146 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_060_256G1_scaffold_113_8
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9017..10861)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WPN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA04510.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
ABC-type multidrug transport system, ATPase and permease components
L3_060_256G1_scaffold_113_9
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10854..13019)
DNA (2166bp) protein (722aa)
ABC-type transport system, multidrug-familyATP-binding/permease (EC:3.6.3.-)
ABC transporter n=1 Tax=Blautia sp. CAG:257 RepID=R5XJ65_9FIRM
ABC transporter {ECO:0000313|EMBL:CDA04512.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L3_060_256G1_scaffold_113_10
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13012..13503)
DNA (492bp) protein (164aa)
Transcriptional regulator MarR family n=1 Tax=Blautia sp. CAG:257 RepID=R5WMA5_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDA04513.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
MarR family transcriptional regulator
L3_060_256G1_scaffold_113_11
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13806..13979)
DNA (174bp) protein (58aa)
Heat-shock protein 101 n=1 Tax=Blautia sp. CAG:257 RepID=R5WWY0_9FIRM
Heat-shock protein 101 {ECO:0000313|EMBL:CDA04514.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_060_256G1_scaffold_113_12
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13976..16570)
DNA (2595bp) protein (865aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Blautia sp. CAG:257 RepID=R5WPP1_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
ATP-dependent chaperone ClpB
L3_060_256G1_scaffold_113_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17670..18008)
DNA (339bp) protein (113aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
DNA polymerase IV n=4 Tax=root RepID=C0ESU0_9FIRM
DNA-directed DNA polymerase
L3_060_256G1_scaffold_113_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18201..18935
DNA (735bp) protein (245aa)
Predicted transcriptional regulator n=2 Tax=Eubacterium RepID=D4JJU3_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBK93890.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_060_256G1_scaffold_113_15
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18993..19193
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BKA9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO84759.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
L3_060_256G1_scaffold_113_16
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19251..19400)
DNA (150bp) protein (50aa)
Flavodoxins n=1 Tax=Dorea sp. CAG:105 RepID=R5D4K7_9FIRM
Flavodoxins {ECO:0000313|EMBL:CCX73734.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Flavodoxins
L3_060_256G1_scaffold_113_17
unknown

Not on your lists

comp(19699..19809)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_060_256G1_scaffold_113_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19788..21155)
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCY7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDM64304.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_060_256G1_scaffold_113_19
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21403..22587)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000360760A
Uncharacterized protein {ECO:0000313|EMBL:EMZ24419.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
oxidoreductase domain-containing protein
L3_060_256G1_scaffold_113_20
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22618..23535)
DNA (918bp) protein (306aa)
AP endonuclease, family 2 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQL8_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EEX67794.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
sugar phosphate isomerases/epimerase
L3_060_256G1_scaffold_113_21
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23552..24604)
DNA (1053bp) protein (351aa)
Oxidoreductase domain protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TT62_THETC
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADL68204.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM; 571 / NCIB 9385 / NCA 3814) (Clostridium thermosaccharolyticum).;"
L3_060_256G1_scaffold_113_22
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24632..25807)
DNA (1176bp) protein (392aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LSC1_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFU75262.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
oxidoreductase domain-containing protein
L3_060_256G1_scaffold_113_23
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25893..26855)
DNA (963bp) protein (321aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LSC2_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFU75263.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
L3_060_256G1_scaffold_113_24
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26836..28338)
DNA (1503bp) protein (501aa)
ABC transporter, ATP-binding protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LSC3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFU75264.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
ABC transporter-like protein
L3_060_256G1_scaffold_113_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28381..29457)
DNA (1077bp) protein (359aa)
Sugar ABC superfamily ATP binding cassette transporter binding protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPI8_9FIRM
Sugar ABC superfamily ATP binding cassette transporter binding protein {ECO:0000313|EMBL:CDD79851.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
two-component sensor histidine kinase/response regulator
L3_060_256G1_scaffold_113_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29495..30310)
DNA (816bp) protein (272aa)
Family 2 AP endonuclease n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNN9_9FIRM
Family 2 AP endonuclease {ECO:0000313|EMBL:CDD79854.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
xylose isomerase
L3_060_256G1_scaffold_113_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30597..32684)
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79855.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LacI family transcriptional regulator
L3_060_256G1_scaffold_113_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33089..33505)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=V8BWI4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR77336.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_060_256G1_scaffold_113_29
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33605..33907)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IUM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25501.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_060_256G1_scaffold_113_30
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34374..35162
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJ58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70833.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
Displaying items 1-30 of 116 in total

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