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L3_060_256G1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_116_1
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..2310)
DNA (2310bp) protein (770aa)
Ig domain protein group 2 domain protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AR08_9CLOT
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CDD60815.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
S-layer domain-containing protein
L3_060_256G1_scaffold_116_2
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2549..2785
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8X8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60816.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_116_3
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

2920..3477
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q2R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC24996.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_256G1_scaffold_116_4
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

3465..4523
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q2R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC24996.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_256G1_scaffold_116_5
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(4562..4783)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PKW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC24993.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Ion channel.
L3_060_256G1_scaffold_116_6
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4870..4983)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B6T9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60819.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_116_7
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(5114..7708)
DNA (2595bp) protein (865aa)
Cation-transporting ATPase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q2N4_9FIRM
Cation-transporting ATPase {ECO:0000313|EMBL:CDC24986.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
HAD ATPase, P-type, IC family protein
L3_060_256G1_scaffold_116_8
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

8490..9587
DNA (1098bp) protein (366aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PKV3_9FIRM
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_256G1_scaffold_116_9
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9588..10238
DNA (651bp) protein (217aa)
Riboflavin synthase alpha subunit n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7V4_9CLOT
Riboflavin synthase alpha subunit {ECO:0000313|EMBL:CDD60822.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
riboflavin synthase subunit alpha
L3_060_256G1_scaffold_116_10
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10257..11462
DNA (1206bp) protein (402aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium sp. CAG:505 RepID=R7AJ10_9CLOT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
riboflavin biosynthesis protein ribBA
L3_060_256G1_scaffold_116_11
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11487..11948
DNA (462bp) protein (154aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.-)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8Y1_9CLOT
L3_060_256G1_scaffold_116_12
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12342..12575
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6PN46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD60825.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_116_13
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(12841..14346)
DNA (1506bp) protein (502aa)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Firmicutes RepID=R6QAC4_9FIRM
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CDC27726.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
IMP dehydrogenase
L3_060_256G1_scaffold_116_14
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(14643..15152)
DNA (510bp) protein (170aa)
Heptaprenyl diphosphate synthase component I n=2 Tax=Firmicutes RepID=R6Q3W4_9FIRM
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:CDC27729.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Predicted membrane protein
L3_060_256G1_scaffold_116_15
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15136..15498)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AJ14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60828.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_116_16
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15925..17472)
DNA (1548bp) protein (516aa)
Amino acid carrier protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B726_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:CDD60829.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
amino acid carrier protein
L3_060_256G1_scaffold_116_17
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(17508..18770)
DNA (1263bp) protein (421aa)
serine dehydratase-like, subunit alpha (EC:4.2.1.-)
UPF0597 protein BN668_01579 n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PL13_9FIRM
UPF0597 protein BN668_01579 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_256G1_scaffold_116_18
unknown

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comp(18797..18937)
DNA (141bp) protein (47aa)

This feature has no annotations

L3_060_256G1_scaffold_116_19
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19068..20447
DNA (1380bp) protein (460aa)
Transporter n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7V9_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Na+-dependent transporters of the SNF family
L3_060_256G1_scaffold_116_20
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20700..21206)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8Y5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60832.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_116_21
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21264..21428
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AJ19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60833.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_116_22
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21659..22090
DNA (432bp) protein (144aa)
Transcriptional regulator MarR family n=1 Tax=Clostridium sp. CAG:505 RepID=R7B771_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDD60834.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Transcriptional regulators
L3_060_256G1_scaffold_116_23
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22096..23163
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AR24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60835.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_116_24
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23192..23875)
DNA (684bp) protein (228aa)
Aminoglycoside 6-adenylyltransferase (AAD(6)) n=1 Tax=Clostridium sp. CAG:505 RepID=R7B6U8_9CLOT
Aminoglycoside 6-adenylyltransferase (AAD(6)) {ECO:0000313|EMBL:CDD60836.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
adenylyltransferase
L3_060_256G1_scaffold_116_25
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(23854..24063)
DNA (210bp) protein (70aa)
Aminoglycoside 6-adenylyltransferase (AAD(6)) n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q2U4_9FIRM
Aminoglycoside 6-adenylyltransferase (AAD(6)) {ECO:0000313|EMBL:CDC25046.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
adenylyltransferase
L3_060_256G1_scaffold_116_26
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

24352..25527
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q6Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC26551.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_256G1_scaffold_116_27
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

25540..26928
DNA (1389bp) protein (463aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QX59_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC26552.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_256G1_scaffold_116_28
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26933..28471
DNA (1539bp) protein (513aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium sp. CAG:505 RepID=R7B987_9CLOT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CDD61921.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
ATPase family associated with various cellular activities (AAA).
L3_060_256G1_scaffold_116_29
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28554..28976)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BA03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61922.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_116_30
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28992..30341)
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Phosphoglucosamine mutase n=2 Tax=Firmicutes RepID=R6Q250_9FIRM
glmM; phosphoglucosamine mutase
Displaying items 1-30 of 103 in total

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