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L3_060_256G1_scaffold_117

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Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_117_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BXS3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19296.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Putative transposase, YhgA-like.
L3_060_256G1_scaffold_117_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(570..2198)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B295_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46908.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glucan 1,6-alpha-glucosidase
L3_060_256G1_scaffold_117_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2211..3965)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B294_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19298.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
glycosidase
L3_060_256G1_scaffold_117_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3978..5447)
DNA (1470bp) protein (490aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=2 Tax=Ruminococcus gnavus RepID=A7B293_RUMGN
L3_060_256G1_scaffold_117_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5478..7739)
DNA (2262bp) protein (754aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phosphorylase n=3 Tax=Lachnospiraceae RepID=A7B292_RUMGN
glycogen/starch/alpha-glucan phosphorylase
L3_060_256G1_scaffold_117_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7767..9710)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BXS7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46913.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glycogen debranching protein
L3_060_256G1_scaffold_117_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9717..11663)
DNA (1947bp) protein (649aa)
pullulanase, type I (EC:3.2.1.41)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B290_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78362.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_060_256G1_scaffold_117_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11677..12549)
DNA (873bp) protein (291aa)
Sugar ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B289_RUMGN
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:EDN78361.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_060_256G1_scaffold_117_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12552..13940)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B288_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78360.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
maltose/maltodextrin transport system permease
L3_060_256G1_scaffold_117_10
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13946..14719)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WU11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06085.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_060_256G1_scaffold_117_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14723..15178)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B286_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78358.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
maltose/maltodextrin transport system substrate-binding protein
L3_060_256G1_scaffold_117_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15192..15296)
DNA (105bp) protein (35aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BVV7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46915.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_117_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15474..16475
DNA (1002bp) protein (334aa)
Transcriptional regulators (EC:5.1.1.1)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JYB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46917.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_117_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16526..17413)
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5UBB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68446.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_060_256G1_scaffold_117_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17688..18338)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B280_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78352.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_060_256G1_scaffold_117_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18377..18844)
DNA (468bp) protein (156aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B279_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78351.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, MarR family
L3_060_256G1_scaffold_117_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18887..19939)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B278_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46923.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Dioxygenases related to 2-nitropropane dioxygenase
L3_060_256G1_scaffold_117_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19972..21660)
DNA (1689bp) protein (563aa)
Acetyl-CoA carboxylase {ECO:0000256|SAAS:SAAS00057486}; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase, carboxyl transferase, beta subunit n=3 Tax=Lachnospiraceae RepID=V8BXT7_RUMGN
L3_060_256G1_scaffold_117_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21676..23019)
DNA (1344bp) protein (448aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Biotin carboxylase n=4 Tax=Clostridiales RepID=A7B276_RUMGN
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EGN46925.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_117_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23022..23453)
DNA (432bp) protein (144aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=4 Tax=Clostridiales RepID=A7B275_RUMGN
L3_060_256G1_scaffold_117_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23467..23892)
DNA (426bp) protein (142aa)
Acetyl-CoA carboxylase n=4 Tax=Clostridiales RepID=F7JYG5_9FIRM
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EGN46927.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L3_060_256G1_scaffold_117_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23903..25141)
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Clostridiales RepID=A7B273_RUMGN
L3_060_256G1_scaffold_117_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25156..25896)
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B272_RUMGN
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EDN78344.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_060_256G1_scaffold_117_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25890..26810)
DNA (921bp) protein (307aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Clostridiales RepID=A7B271_RUMGN
L3_060_256G1_scaffold_117_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26803..27741)
DNA (939bp) protein (313aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Enoyl-(Acyl-carrier-protein) reductase II n=4 Tax=Clostridiales RepID=F7JYG7_9FIRM
Enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:CCZ68435.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_060_256G1_scaffold_117_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27758..27982)
DNA (225bp) protein (75aa)
Acyl carrier protein n=4 Tax=Clostridiales RepID=A7B269_RUMGN
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acyl carrier protein
L3_060_256G1_scaffold_117_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28000..28962)
DNA (963bp) protein (321aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B268_RUMGN
L3_060_256G1_scaffold_117_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29088..29270)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B267_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68432.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_060_256G1_scaffold_117_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29688..31064
DNA (1377bp) protein (459aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BWY4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46940.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Na+-driven multidrug efflux pump
L3_060_256G1_scaffold_117_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31789..32739)
DNA (951bp) protein (317aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
beta-galactosidase (EC:3.2.1.23)
Beta galactosidase small chain n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRT4_9FIRM
Displaying items 1-30 of 148 in total

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