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L3_060_256G1_scaffold_133

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_133_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..673
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BA88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68723.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_060_256G1_scaffold_133_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

666..1376
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QX33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63287.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_060_256G1_scaffold_133_3
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1978..3111
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JD38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31896.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
ATPase
L3_060_256G1_scaffold_133_4
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3072..5516
DNA (2445bp) protein (815aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JL83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31897.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_060_256G1_scaffold_133_5
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5513..6631
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T7M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68190.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
VWA containing CoxE family protein
L3_060_256G1_scaffold_133_6
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6648..8321
DNA (1674bp) protein (558aa)
SWIM zinc finger domain-containing protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZX2_9CLOT
Zinc finger SWIM domain protein {ECO:0000313|EMBL:EET85217.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
zinc finger SWIM domain protein
L3_060_256G1_scaffold_133_7
unknown

Not on your lists

8318..8665
DNA (348bp) protein (116aa)

This feature has no annotations

L3_060_256G1_scaffold_133_8
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8662..12282
DNA (3621bp) protein (1207aa)
Molybdate metabolism regulator n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TJN4_9FIRM
Molybdate metabolism regulator {ECO:0000313|EMBL:CDC73618.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
protein of unknown function DUF4132
L3_060_256G1_scaffold_133_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12719..14017
DNA (1299bp) protein (433aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO24338.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
FAD dependent oxidoreductase
L3_060_256G1_scaffold_133_10
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14087..15994
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M781_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66556.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_060_256G1_scaffold_133_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16007..16219
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IT70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41202.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_060_256G1_scaffold_133_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16471..17394
DNA (924bp) protein (308aa)
ABC transporter, substrate-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZJ3_9FIRM
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EDM98842.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_060_256G1_scaffold_133_13
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17391..18158
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZJ2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM98841.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ATPase component of Mn/Zn ABC-type transporter
L3_060_256G1_scaffold_133_14
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18160..19008
DNA (849bp) protein (283aa)
ABC 3 transport family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZJ1_9FIRM
ABC 3 transport family protein {ECO:0000313|EMBL:EDM98840.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
znuB; ABC-type Mn2+/Zn2+ transport systems, permease component
L3_060_256G1_scaffold_133_15
unknown

Not on your lists

19030..19179
DNA (150bp) protein (50aa)

This feature has no annotations

L3_060_256G1_scaffold_133_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19200..20069
DNA (870bp) protein (290aa)
Phospholipase, patatin family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV66_9FIRM
Phospholipase, patatin family {ECO:0000313|EMBL:EDN00267.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_060_256G1_scaffold_133_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20210..21577
DNA (1368bp) protein (456aa)
Citrate synthase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSY7_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
citrate synthase
L3_060_256G1_scaffold_133_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21652..22947)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YM01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34639.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative hydrolase
L3_060_256G1_scaffold_133_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23130..23636)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CA00_9FIRM
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:KGF54315.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_256G1_scaffold_133_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23670..24542)
DNA (873bp) protein (291aa)
4Fe-4S binding domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P108_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDM98029.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
iron-sulfur cluster-binding protein
L3_060_256G1_scaffold_133_21
unknown

Not on your lists

comp(24535..24681)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_060_256G1_scaffold_133_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24678..25259)
DNA (582bp) protein (194aa)
Redoxin family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P106_9FIRM
Redoxin family protein {ECO:0000313|EMBL:EDM98026.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
AhpC/TSA family.
L3_060_256G1_scaffold_133_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25339..25896)
DNA (558bp) protein (186aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Phosphodiesterase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4L8_9FIRM
hypothetical protein
L3_060_256G1_scaffold_133_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26033..26401)
DNA (369bp) protein (123aa)
Stage V sporulation protein AE n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DDE5_9CLOT
Stage V sporulation protein AE {ECO:0000313|EMBL:KGF56428.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
stage V sporulation protein AE
L3_060_256G1_scaffold_133_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26414..27427)
DNA (1014bp) protein (338aa)
Stage V sporulation protein AD n=2 Tax=Clostridiales RepID=H1CG63_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:KGF56429.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoVAD; stage V sporulation protein AD
L3_060_256G1_scaffold_133_26
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27640..28248
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97339.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_060_256G1_scaffold_133_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28272..29018
DNA (747bp) protein (249aa)
Acyl-ACP thioesterase n=2 Tax=Clostridiales RepID=G9YNF5_9FIRM
Acyl-ACP thioesterase {ECO:0000313|EMBL:EHM53486.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
acyl-ACP thioesterase
L3_060_256G1_scaffold_133_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29077..30552
DNA (1476bp) protein (492aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2Y3_9FIRM
L3_060_256G1_scaffold_133_29
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30875..34204
DNA (3330bp) protein (1110aa)
ATP-dependent nuclease subunit B (EC:3.6.1.-)
Putative ATP-dependent nuclease subunit B n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVW2_9FIRM
Putative ATP-dependent nuclease subunit B {ECO:0000313|EMBL:EDM99855.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_060_256G1_scaffold_133_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34248..35687
DNA (1440bp) protein (480aa)
Amino acid carrier protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56439.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
amino acid carrier protein
Displaying items 1-30 of 84 in total

View Taxonomy