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L3_060_256G1_scaffold_136

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Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_136_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..5307)
DNA (5307bp) protein (1769aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JTS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41858.1}; Flags: Fragment;; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterised Sugar-binding Domain.
L3_060_256G1_scaffold_136_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5416..7401)
DNA (1986bp) protein (662aa)
Cell wall surface anchor family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6A7_RUMGN
Cell wall surface anchor family protein {ECO:0000313|EMBL:EDN76659.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
internalin-like protein
L3_060_256G1_scaffold_136_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7420..11493)
DNA (4074bp) protein (1358aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BS75_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18028.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_060_256G1_scaffold_136_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11762..13021)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSG1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN41862.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
lyzozyme M1
L3_060_256G1_scaffold_136_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13018..13458)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BTD1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18030.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
toxin secretion/phage lysis holin
L3_060_256G1_scaffold_136_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13565..14056)
DNA (492bp) protein (164aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B6A3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18031.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_060_256G1_scaffold_136_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14062..14313)
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B6A2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN41865.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_136_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14529..14945)
DNA (417bp) protein (139aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B6A0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN41866.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_136_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15052..15339)
DNA (288bp) protein (96aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B699_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN41867.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_136_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15336..15512)
DNA (177bp) protein (59aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B699_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18034.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_060_256G1_scaffold_136_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15532..16428)
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7B698_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18035.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_060_256G1_scaffold_136_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16515..17540)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BS84_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18038.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_060_256G1_scaffold_136_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17702..24700)
DNA (6999bp) protein (2333aa)
wapA1; tRNA(Glu)-specific nuclease WapA (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B690_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76642.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_060_256G1_scaffold_136_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24940..25263
DNA (324bp) protein (108aa)
Toxin-antitoxin system, antitoxin component, Xre family n=3 Tax=Lachnospiraceae RepID=A7B688_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18044.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
putative Xre family DNA-binding protein
L3_060_256G1_scaffold_136_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25284..25754
DNA (471bp) protein (157aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BTE4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN41535.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_136_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26156..26974)
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BUA2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN41536.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Colicin V production protein.
L3_060_256G1_scaffold_136_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26983..28176)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BTC6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18047.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_060_256G1_scaffold_136_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28224..29345)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TV11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67124.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
LysM domain.
L3_060_256G1_scaffold_136_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29490..30155)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B683_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76635.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_060_256G1_scaffold_136_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30220..30516
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B682_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76634.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_060_256G1_scaffold_136_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30939..31877)
DNA (939bp) protein (313aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B679_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18058.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_060_256G1_scaffold_136_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31865..32701)
DNA (837bp) protein (279aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B678_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49597.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_136_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32717..33370)
DNA (654bp) protein (218aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transaldolase, putative, TalC family (EC:2.2.1.2)
Fructose-6-phosphate aldolase n=4 Tax=Clostridiales RepID=V8BTF6_RUMGN
L3_060_256G1_scaffold_136_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33556..34668)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7B676_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18061.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
transcriptional regulator
L3_060_256G1_scaffold_136_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34689..35285)
DNA (597bp) protein (199aa)
Recombination protein RecR n=4 Tax=Clostridiales RepID=A7B675_RUMGN
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
recombination protein RecR
L3_060_256G1_scaffold_136_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35307..35660)
DNA (354bp) protein (118aa)
Nucleoid-associated protein RUMGNA_03085 n=4 Tax=Clostridiales RepID=A7B674_RUMGN
Nucleoid-associated protein RUMGNA_03085 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
conserved hypothetical protein TIGR00103
L3_060_256G1_scaffold_136_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35664..37232)
DNA (1569bp) protein (523aa)
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:EDN76625.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDN76625.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma and tau n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B673_RUMGN
L3_060_256G1_scaffold_136_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37260..38336)
DNA (1077bp) protein (359aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=3 Tax=Lachnospiraceae RepID=A7B672_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18065.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_060_256G1_scaffold_136_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38554..39417
DNA (864bp) protein (288aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=4 Tax=Clostridiales RepID=A7B670_RUMGN
L3_060_256G1_scaffold_136_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39468..40322)
DNA (855bp) protein (285aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BTE2_RUMGN
Displaying items 1-30 of 163 in total

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