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L3_060_256G1_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_146_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(538..1323)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AN64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56954.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_060_256G1_scaffold_146_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1626..3674
DNA (2049bp) protein (683aa)
DHHA1 domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFI7_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EEQ59110.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
phosphoesterase RecJ domain-containing protein
L3_060_256G1_scaffold_146_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3696..4142
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF88_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LSU ribosomal protein L9P
L3_060_256G1_scaffold_146_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4271..5629
DNA (1359bp) protein (453aa)
primary replicative DNA helicase (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40789.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_060_256G1_scaffold_146_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5744..6442
DNA (699bp) protein (233aa)
MerR family transcriptional regulator n=3 Tax=Clostridium RepID=N9Z9L3_9CLOT
MerR family transcriptional regulator {ECO:0000313|EMBL:ENZ16727.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
MerR family transcriptional regulator
L3_060_256G1_scaffold_146_6
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6591..8204
DNA (1614bp) protein (538aa)
Putative endopeptidase {ECO:0000313|EMBL:KJJ77429.1}; EC=3.4.-.- {ECO:0000313|EMBL:KJJ77429.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTG0_9CLOT
peptidoglycan-binding domain-containing protein
L3_060_256G1_scaffold_146_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8312..9007
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFI0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEQ59103.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_060_256G1_scaffold_146_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9016..11373
DNA (2358bp) protein (786aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40796.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
integral membrane sensor signal transduction histidine kinase
L3_060_256G1_scaffold_146_9
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11453..12202)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTG3_9CLOT
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:KJJ77432.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
aminoglycoside phosphotransferase
L3_060_256G1_scaffold_146_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12358..14325)
DNA (1968bp) protein (656aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVQ8_9CLOT
L3_060_256G1_scaffold_146_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14327..15667)
DNA (1341bp) protein (447aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFB2_9CLOT
Glycosidases
L3_060_256G1_scaffold_146_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15697..15936)
DNA (240bp) protein (80aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RIW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24718.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_060_256G1_scaffold_146_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16065..16418)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40817.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ArsR family transcriptional regulator
L3_060_256G1_scaffold_146_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16788..17360
DNA (573bp) protein (191aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RIW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18872.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
peptidase A24A prepilin type IV
L3_060_256G1_scaffold_146_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17473..18474
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40818.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_060_256G1_scaffold_146_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18467..19669
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40821.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
type II secretion system protein E
L3_060_256G1_scaffold_146_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19611..20516
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40823.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
type II secretion system F domain-containing protein
L3_060_256G1_scaffold_146_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20529..21803
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40824.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_060_256G1_scaffold_146_19
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21845..22042
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B3Z2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD58531.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_060_256G1_scaffold_146_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22042..23979
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40827.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_060_256G1_scaffold_146_21
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24014..25072
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95296.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_060_256G1_scaffold_146_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25072..25575
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40830.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Type IV leader peptidase family.
L3_060_256G1_scaffold_146_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25594..25995
DNA (402bp) protein (134aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RIV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18863.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_060_256G1_scaffold_146_24
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25973..27424
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JKB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63328.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
FHA domain-containing protein
L3_060_256G1_scaffold_146_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27433..28836)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41356.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glycoside hydrolase family protein
L3_060_256G1_scaffold_146_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29032..29994
DNA (963bp) protein (321aa)
Putative transcriptional regulator YfiF n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX48_9CLOT
Putative transcriptional regulator YfiF {ECO:0000313|EMBL:CCY41357.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
AraC family transcriptional regulator
L3_060_256G1_scaffold_146_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29979..31481)
DNA (1503bp) protein (501aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM46_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57465.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
response regulator
L3_060_256G1_scaffold_146_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31475..33304)
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XG51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98662.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
histidine kinase
L3_060_256G1_scaffold_146_29
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33533..34891
DNA (1359bp) protein (453aa)
Putative extracellular solute-binding domain protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T5U9_9CLOT
Putative extracellular solute-binding domain protein {ECO:0000313|EMBL:CCZ61295.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC transporter, extracellular substrate binding protein
L3_060_256G1_scaffold_146_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34994..35884
DNA (891bp) protein (297aa)
Multiple sugar ABC transporter permease n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W6N1_9CLOT
Multiple sugar ABC transporter permease {ECO:0000313|EMBL:ENY98660.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter, permease protein, probably Saturated and unsaturated oligogalacturonide transporter
Displaying items 1-30 of 82 in total

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