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L3_060_256G1_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_154_1
unknown

Not on your lists

comp(115..204)
DNA (90bp) protein (30aa)

This feature has no annotations

L3_060_256G1_scaffold_154_2
Anaerococcus lactolyticus, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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537..893
DNA (357bp) protein (119aa)
Resolvase, N-terminal domain protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BG59_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEI86174.1}; TaxID=525254 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus lactolyticus ATCC 51172.;"
phage site-specific recombinase
L3_060_256G1_scaffold_154_3
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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890..1498
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis EnGen0280 RepID=R3YLS3_ENTFL
resolvase domain-containing protein
Resolvase domain {ECO:0000313|EMBL:ABX43354.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_060_256G1_scaffold_154_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1584..1922
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1V6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38491.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_060_256G1_scaffold_154_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1926..2699
DNA (774bp) protein (258aa)
TatD family hydrolase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1Y9_9CLOT
TatD family hydrolase {ECO:0000313|EMBL:EOQ37172.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative deoxyribonuclease
L3_060_256G1_scaffold_154_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2754..3815)
DNA (1062bp) protein (354aa)
proline aminopeptidase (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37278.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_060_256G1_scaffold_154_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3812..4246)
DNA (435bp) protein (145aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W294_9CLOT
L3_060_256G1_scaffold_154_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4540..5541
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1R1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38798.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
deoxyguanosinetriphosphate triphosphohydrolase-like protein
L3_060_256G1_scaffold_154_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5569..7317
DNA (1749bp) protein (583aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W6L2_9CLOT
L3_060_256G1_scaffold_154_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7334..8557
DNA (1224bp) protein (408aa)
RNA polymerase sigma factor SigA n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W2M7_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
sigA; RNA polymerase sigma factor SigA
L3_060_256G1_scaffold_154_11
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8630..9487
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKX8_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD07275.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_060_256G1_scaffold_154_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9577..10035)
DNA (459bp) protein (153aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1R5_9CLOT
L3_060_256G1_scaffold_154_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10102..11610)
DNA (1509bp) protein (503aa)
inosine 5-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W6M5_9CLOT
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EOQ38807.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_060_256G1_scaffold_154_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11797..12855)
DNA (1059bp) protein (353aa)
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:EJF40668.1}; EC=1.1.1.- {ECO:0000313|EMBL:EJF40668.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036D4424
NADH:flavin oxidoreductase
L3_060_256G1_scaffold_154_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12848..13249)
DNA (402bp) protein (134aa)
Secondary thiamine-phosphate synthase enzyme n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VUI9_9CLOT
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:EOQ36218.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_060_256G1_scaffold_154_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13246..13815)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VUQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ36219.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
HD domain.
L3_060_256G1_scaffold_154_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13812..15137)
DNA (1326bp) protein (442aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.-)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ36220.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_060_256G1_scaffold_154_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15137..15346)
DNA (210bp) protein (70aa)
UPF0291 protein HMPREF1526_02253 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VVC5_9CLOT
UPF0291 protein HMPREF1526_02253 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_060_256G1_scaffold_154_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15512..16777
DNA (1266bp) protein (422aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.47)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZ71_9CLOT
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EOQ36222.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_060_256G1_scaffold_154_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16793..17239
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VUJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ36223.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
N-acetyltransferase GCN5
L3_060_256G1_scaffold_154_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17271..18158)
DNA (888bp) protein (296aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
RluA family pseudouridine synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXV2_9CLOT
RluA; pseudouridylate synthase, 23S RNA-specific
L3_060_256G1_scaffold_154_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18328..19359
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37288.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
peptidase M42
L3_060_256G1_scaffold_154_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19359..20381
DNA (1023bp) protein (341aa)
endoglucanase M (EC:3.2.1.4)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W2A4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37287.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_060_256G1_scaffold_154_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20401..21417
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37286.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
peptidase M42 family protein
L3_060_256G1_scaffold_154_25
Exiguobacterium sibiricum, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(21456..22268)
DNA (813bp) protein (271aa)
Uncharacterized conserved membrane protein n=3 Tax=Clostridium acetobutylicum RepID=Q97FS9_CLOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB62411.1}; TaxID=262543 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15).;"
L3_060_256G1_scaffold_154_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22272..24230)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37246.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative hydrolase
L3_060_256G1_scaffold_154_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24383..25486)
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W266_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
GTP-binding protein YchF
L3_060_256G1_scaffold_154_28
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25600..26781)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7FY47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71571.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_060_256G1_scaffold_154_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26892..27098)
DNA (207bp) protein (69aa)
Excisionase family DNA binding domain-containing protein n=2 Tax=Clostridiales RepID=G9RSH7_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EHL71572.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Excisionase from transposon Tn916.
L3_060_256G1_scaffold_154_30
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27130..27993)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FLW6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY05873.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
DNA replication protein
Displaying items 1-30 of 97 in total

View Taxonomy