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L3_060_256G1_scaffold_158

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_158_1
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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793..1713
DNA (921bp) protein (307aa)
Oxidoreductase aldo/keto reductase family n=1 Tax=Clostridium sp. CAG:505 RepID=R7AIJ8_9CLOT
Oxidoreductase aldo/keto reductase family {ECO:0000313|EMBL:CDD60658.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
aldo/keto reductase
L3_060_256G1_scaffold_158_2
unknown

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comp(1658..1921)
DNA (264bp) protein (88aa)

This feature has no annotations

L3_060_256G1_scaffold_158_3
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(2281..4911)
DNA (2631bp) protein (877aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AEP9_9FIRM
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CCX39462.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
L3_060_256G1_scaffold_158_4
unknown

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5089..5334
DNA (246bp) protein (82aa)

This feature has no annotations

L3_060_256G1_scaffold_158_5
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5485..6132
DNA (648bp) protein (216aa)
PF06570 family protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B6J4_9CLOT
PF06570 family protein {ECO:0000313|EMBL:CDD60661.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_158_6
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6229..7617)
DNA (1389bp) protein (463aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B6S6_9CLOT
L3_060_256G1_scaffold_158_7
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(7944..8672)
DNA (729bp) protein (243aa)
DNA repair protein RecO n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q1G7_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
DNA repair protein RecO
L3_060_256G1_scaffold_158_8
unknown

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comp(8731..8886)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_060_256G1_scaffold_158_9
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(8958..9863)
DNA (906bp) protein (302aa)
GTPase Era n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PTQ3_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
GTP-binding protein Era
L3_060_256G1_scaffold_158_10
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9874..10341)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AQM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60665.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_158_11
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10345..10914)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8P3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60666.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
phage SPO1 DNA polymerase-related protein
L3_060_256G1_scaffold_158_12
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10921..11259)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6PR86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD60667.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_158_13
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11283..11675)
DNA (393bp) protein (131aa)
cdd; cytidine deaminase Cdd (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Clostridium sp. CAG:505 RepID=R7AIK7_9CLOT
Cytidine deaminase {ECO:0000313|EMBL:CDD60668.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_158_14
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(11694..12161)
DNA (468bp) protein (156aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Endoribonuclease YbeY n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PTQ9_9FIRM
metalloprotease
L3_060_256G1_scaffold_158_15
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12145..14268)
DNA (2124bp) protein (708aa)
7TM receptor with intracellular metal dependent phosphohydrolase n=1 Tax=Clostridium sp. CAG:505 RepID=R7AQN1_9CLOT
7TM receptor with intracellular metal dependent phosphohydrolase {ECO:0000313|EMBL:CDD60670.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
metal dependent phosphohydrolase
L3_060_256G1_scaffold_158_16
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14234..15247)
DNA (1014bp) protein (338aa)
Phosphate starvation-inducible protein PhoH predicted ATPase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B6T1_9CLOT
Phosphate starvation-inducible protein PhoH predicted ATPase {ECO:0000313|EMBL:CDD60671.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L3_060_256G1_scaffold_158_17
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(15201..16361)
DNA (1161bp) protein (387aa)
Sporulation protein YqfD n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PR91_9FIRM
Sporulation protein YqfD {ECO:0000313|EMBL:CDC26913.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
putative stage IV sporulation YqfD
L3_060_256G1_scaffold_158_18
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16458..16721)
DNA (264bp) protein (88aa)
Sporulation protein YqfC n=2 Tax=Firmicutes RepID=R6Q1H9_9FIRM
Sporulation protein YqfC {ECO:0000313|EMBL:CDD60673.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_158_19
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(16861..17655)
DNA (795bp) protein (265aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5A7S6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX39280.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
ABC-type uncharacterized transport system, ATPase component
L3_060_256G1_scaffold_158_20
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17660..18556)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AK54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61173.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
ABC-type uncharacterized transport system, permease component
L3_060_256G1_scaffold_158_21
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18666..19667)
DNA (1002bp) protein (334aa)
ABC-type uncharacterized transport system periplasmic component n=1 Tax=Clostridium sp. CAG:505 RepID=R7B9N0_9CLOT
ABC-type uncharacterized transport system periplasmic component {ECO:0000313|EMBL:CDD61174.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
ABC-type uncharacterized transport system, periplasmic component
L3_060_256G1_scaffold_158_22
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(20062..20511)
DNA (450bp) protein (150aa)
GatB/YqeY domain protein n=2 Tax=Firmicutes RepID=R6PQM3_9FIRM
GatB/YqeY domain protein {ECO:0000313|EMBL:CDC25830.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
GatB/YqeY
L3_060_256G1_scaffold_158_23
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(20548..20724)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=2 Tax=Firmicutes RepID=R6Q4W1_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
30S ribosomal protein S21
L3_060_256G1_scaffold_158_24
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(21103..23364)
DNA (2262bp) protein (754aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PN82_9FIRM
1,4-alpha-glucan-branching protein
L3_060_256G1_scaffold_158_25
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

23628..25253
DNA (1626bp) protein (542aa)
Predicted exonuclease of the beta-lactamase fold involved in RNA processing n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PQP0_9FIRM
Predicted exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:CDC25845.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L3_060_256G1_scaffold_158_26
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(25682..27025)
DNA (1344bp) protein (448aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QV73_9FIRM
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:CDC25847.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
TldD/PmbA family protein
L3_060_256G1_scaffold_158_27
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27035..28417)
DNA (1383bp) protein (461aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B9N5_9CLOT
Peptidase U62 modulator of DNA gyrase {ECO:0000313|EMBL:CDD61182.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
peptidase U62 modulator of DNA gyrase
L3_060_256G1_scaffold_158_28
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28411..28968)
DNA (558bp) protein (186aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Holliday junction resolvase RecU n=1 Tax=Clostridium sp. CAG:505 RepID=R7AK62_9CLOT
hypothetical protein
L3_060_256G1_scaffold_158_29
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(29060..29857)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PQP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC25850.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_256G1_scaffold_158_30
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(29970..31340)
DNA (1371bp) protein (457aa)
Putative efflux protein MATE family n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q4X9_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC25851.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
putative efflux protein, MATE family
Displaying items 1-30 of 83 in total

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