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L3_060_256G1_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_165_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(96..317)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BN24_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16182.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Putative phage regulator/repressor protein
L3_060_256G1_scaffold_165_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(516..953)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BLX6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16183.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_060_256G1_scaffold_165_3
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1007..1309)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B7T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85377.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_060_256G1_scaffold_165_4
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1363..1761)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N666_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75547.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L3_060_256G1_scaffold_165_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2164..2598)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JV37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49214.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
MarR family transcriptional regulator
L3_060_256G1_scaffold_165_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2750..5182)
DNA (2433bp) protein (811aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=3 Tax=Lachnospiraceae RepID=A7B6S1_RUMGN
L3_060_256G1_scaffold_165_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5525..6940)
DNA (1416bp) protein (472aa)
Amino acid carrier protein n=3 Tax=Lachnospiraceae RepID=A7B6S3_RUMGN
Amino acid carrier protein {ECO:0000313|EMBL:EDN76185.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
amino acid carrier protein
L3_060_256G1_scaffold_165_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7196..7978)
DNA (783bp) protein (261aa)
Metal cation transporter, ZIP family n=2 Tax=Ruminococcus gnavus RepID=A7B6S4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16187.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
zinc/iron permease
L3_060_256G1_scaffold_165_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8074..8508)
DNA (435bp) protein (145aa)
Flavodoxin n=4 Tax=Clostridiales RepID=A7B6S5_RUMGN
Flavodoxin {ECO:0000313|EMBL:EGN49218.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
flavodoxin, short chain
L3_060_256G1_scaffold_165_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8525..9112)
DNA (588bp) protein (196aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6S6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49219.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_165_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9340..9762
DNA (423bp) protein (141aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6S7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49220.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_165_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9838..11514)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6S8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49221.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_165_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11653..13098)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UBS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68601.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Trk-type K+ transport systems, membrane components
L3_060_256G1_scaffold_165_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13103..14464)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TS93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68600.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
K+ transport systems, NAD-binding component
L3_060_256G1_scaffold_165_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14674..16752)
DNA (2079bp) protein (693aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Translation elongation factor G n=3 Tax=Lachnospiraceae RepID=V8BM31_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49224.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_165_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16984..18090
DNA (1107bp) protein (369aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BN13_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16195.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_060_256G1_scaffold_165_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18109..19401
DNA (1293bp) protein (431aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Lachnospiraceae RepID=F7JV49_9FIRM
L3_060_256G1_scaffold_165_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19445..20212)
DNA (768bp) protein (256aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5UBS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49227.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
GntR family transcriptional regulator
L3_060_256G1_scaffold_165_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20271..21566)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BLZ1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16198.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
uracil-xanthine permease
L3_060_256G1_scaffold_165_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21587..22066)
DNA (480bp) protein (160aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=4 Tax=Clostridiales RepID=A7B6T8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49229.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
CMP/dCMP deaminase zinc-binding protein
L3_060_256G1_scaffold_165_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22249..24765)
DNA (2517bp) protein (839aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-translocating P-type ATPase n=2 Tax=Lachnospiraceae RepID=V8BN18_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49230.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_165_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24780..25088)
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B6U0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49231.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_165_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25269..26276)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BN44_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16202.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_060_256G1_scaffold_165_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26317..27762)
DNA (1446bp) protein (482aa)
Carbon starvation protein CstA n=3 Tax=Lachnospiraceae RepID=A7B6U3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16203.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Carbon starvation protein, predicted membrane protein
L3_060_256G1_scaffold_165_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27884..29698)
DNA (1815bp) protein (605aa)
Alcohol acetyltransferase n=3 Tax=Clostridiales RepID=A7B6U4_RUMGN
Alcohol acetyltransferase {ECO:0000313|EMBL:CCZ68072.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Alcohol acetyltransferase.
L3_060_256G1_scaffold_165_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29701..30750)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BN21_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16205.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
esterase/lipase
L3_060_256G1_scaffold_165_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30772..31869)
DNA (1098bp) protein (366aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TXM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68074.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_060_256G1_scaffold_165_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32165..32626
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68075.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
N-acetyltransferase GCN5
L3_060_256G1_scaffold_165_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32638..33432)
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BM02_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49239.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_165_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33550..34038)
DNA (489bp) protein (163aa)
siroheme synthase, N-terminal domain (EC:1.3.1.76 4.99.1.4)
Siroheme synthase domain protein n=2 Tax=Clostridiales RepID=R5UGZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD16209.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Displaying items 1-30 of 96 in total

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