name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_060_256G1_scaffold_169_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1..294)
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Transcription termination/antitermination factor NusG n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D6Y9_CLOSY
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:ERI77212.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Transcription antiterminator
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L3_060_256G1_scaffold_169_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(299..847)
|
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BCN6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI75899.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
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|
L3_060_256G1_scaffold_169_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1263..4985)
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hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000381B016
Uncharacterized protein {ECO:0000313|EMBL:CDD78731.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted permease.
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L3_060_256G1_scaffold_169_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4996..5733)
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ABC transporter ATP-binding protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XLW6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD07332.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ABC-type antimicrobial peptide transport system, ATPase component
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L3_060_256G1_scaffold_169_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5800..6297
|
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34826.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
C_GCAxxG_C_C family protein
|
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L3_060_256G1_scaffold_169_6
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
6398..7525
|
4Fe-4S binding domain protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F902_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDE10197.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
4Fe-4S ferredoxin
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L3_060_256G1_scaffold_169_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(7584..8195)
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Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJ91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58453.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
uridine kinase
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L3_060_256G1_scaffold_169_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8199..9161)
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SPFH/Band 7/PHB domain protein n=2 Tax=Clostridium RepID=B6FK97_9CLOT
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EEA83560.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Membrane protease subunits, stomatin/prohibitin homologs
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L3_060_256G1_scaffold_169_9
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(9163..9591)
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Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6E8T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA96963.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
|
|
L3_060_256G1_scaffold_169_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(9848..11200)
|
MATE efflux family protein n=1 Tax=Clostridium sp. D5 RepID=F0Z5I0_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EGB90663.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
|
|
L3_060_256G1_scaffold_169_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(11210..12775)
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Uncharacterized protein n=2 Tax=Clostridium RepID=R6PUA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24344.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Group I intron
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L3_060_256G1_scaffold_169_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
13320..14117
|
Transcriptional regulator, MerR family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C047_9CLOT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEG74775.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
MerR family transcriptional regulator
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L3_060_256G1_scaffold_169_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(14114..15328)
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LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=2 Tax=Clostridium RepID=B6FUM7_9CLOT
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L3_060_256G1_scaffold_169_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15443..16258)
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diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Diaminopimelate epimerase n=1 Tax=Dorea sp. CAG:317 RepID=R6W8D4_9FIRM
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L3_060_256G1_scaffold_169_15
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(16396..17172)
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Polysaccharide deacetylase family sporulation protein PdaB n=1 Tax=Dorea sp. 5-2 RepID=R9NC47_9FIRM
Polysaccharide deacetylase family sporulation protein PdaB {ECO:0000313|EMBL:EOS80678.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Predicted xylanase/chitin deacetylase
|
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L3_060_256G1_scaffold_169_16
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria
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Not on your lists |
comp(17247..18263)
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Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6Z3F2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD40735.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
hypothetical protein
|
|
L3_060_256G1_scaffold_169_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
18386..19264
|
Transcriptional regulator (LysR family) n=1 Tax=Clostridium sp. D5 RepID=F0YYL6_9CLOT
Transcriptional regulator (LysR family) {ECO:0000313|EMBL:EGB93318.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
LysR family transcriptional regulator
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|
L3_060_256G1_scaffold_169_18
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
19268..19864
|
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MN99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69277.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
|
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L3_060_256G1_scaffold_169_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(19812..21134)
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Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Signal transduction histidine kinase (EC:2.7.13.3)
Sensor histidine kinase n=1 Tax=Clostridium sp. D5 RepID=F0Z0P5_9CLOT
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L3_060_256G1_scaffold_169_20
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21155..21838)
|
Response regulator receiver domain protein n=2 Tax=Coprococcus RepID=C0B4Y5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG91510.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
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L3_060_256G1_scaffold_169_21
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(21835..22521)
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Phosphate-specific transport system accessory protein PhoU n=1 Tax=Dorea sp. CAG:105 RepID=R5DDK3_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
phosphate uptake regulator, PhoU
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L3_060_256G1_scaffold_169_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(22524..23276)
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Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate import ATP-binding protein pstB 3 n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP04_9FIRM
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L3_060_256G1_scaffold_169_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(23276..24109)
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Phosphate ABC transporter n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVP6_9FIRM
Phosphate ABC transporter {ECO:0000313|EMBL:CCZ67389.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phosphate ABC transporter inner membrane subunit PstA
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L3_060_256G1_scaffold_169_24
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(24102..24971)
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Phosphate ABC transporter, permease PstC n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD67_9FIRM
Phosphate ABC transporter, permease PstC {ECO:0000313|EMBL:EGG80851.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
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L3_060_256G1_scaffold_169_25
Firmicutes bacterium CAG:227, Firmicutes, Bacteria
|
Not on your lists |
comp(24974..25864)
|
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VJG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94409.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
pstS2; phosphate ABC transporter substrate-binding protein
|
|
L3_060_256G1_scaffold_169_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
26260..27138
|
Putative YitT family protein n=1 Tax=Clostridium sp. D5 RepID=F0YV32_9CLOT
Putative YitT family protein {ECO:0000313|EMBL:EGB94752.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
|
|
L3_060_256G1_scaffold_169_27
unknown
|
Not on your lists |
comp(27262..27603)
|
This feature has no annotations |
|
L3_060_256G1_scaffold_169_28
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(27779..28891)
|
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Alanine dehydrogenase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C426_9CLOT
alanine dehydrogenase
|
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L3_060_256G1_scaffold_169_29
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(29053..31182)
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DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase III n=1 Tax=Blautia producta RepID=UPI0003828F85
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L3_060_256G1_scaffold_169_30
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(31304..31999)
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RelA/SpoT domain protein n=5 Tax=Clostridiales RepID=A5KM20_9FIRM
RelA/SpoT domain-containing protein {ECO:0000313|EMBL:EFV18837.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
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