ggKbase home page

L3_060_256G1_scaffold_173

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_173_1
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..963
DNA (963bp) protein (321aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QI27_9BURK
histidine kinase
L3_060_256G1_scaffold_173_2
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

960..1583
DNA (624bp) protein (208aa)
Putative transcriptional regulatory protein FixJ n=3 Tax=Burkholderiales RepID=D9Y5F1_9BURK
Putative transcriptional regulatory protein FixJ {ECO:0000313|EMBL:CCX88106.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
fixJ; transcriptional regulator fixJ
L3_060_256G1_scaffold_173_3
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1661..3070
DNA (1410bp) protein (470aa)
fumarate reductase flavoprotein subunit (EC:1.3.5.4)
Fumarate reductase flavoprotein subunit n=2 Tax=Burkholderiales RepID=D9Y5F2_9BURK
Fumarate reductase flavoprotein subunit {ECO:0000313|EMBL:CCX88105.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L3_060_256G1_scaffold_173_4
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3142..3348)
DNA (207bp) protein (69aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y5F3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX88104.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L3_060_256G1_scaffold_173_5
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3345..3692)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Parasutterella RepID=F3QI31_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX88103.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L3_060_256G1_scaffold_173_6
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3897..5168
DNA (1272bp) protein (424aa)
Amidohydrolase n=2 Tax=Burkholderiales RepID=D9Y5F5_9BURK
Amidohydrolase {ECO:0000313|EMBL:EFL83170.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
aminohydrolase
L3_060_256G1_scaffold_173_7
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5263..6330)
DNA (1068bp) protein (356aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5F6_9BURK
L3_060_256G1_scaffold_173_8
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6583..7539)
DNA (957bp) protein (319aa)
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:EFL83172.1}; EC=2.7.7.41 {ECO:0000313|EMBL:EFL83172.1};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Phosphatidate cytidylyltransferase n=3 Tax=Burkholderiales RepID=D9Y5F7_9BURK
phosphatidate cytidylyltransferase
L3_060_256G1_scaffold_173_9
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7541..8242)
DNA (702bp) protein (234aa)
Acyltransferase n=2 Tax=Parasutterella RepID=F3QI35_9BURK
Acyltransferase {ECO:0000313|EMBL:CCX88099.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
L3_060_256G1_scaffold_173_10
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8407..9594)
DNA (1188bp) protein (396aa)
Transporter major facilitator family protein n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E6K3_9BURK
Transporter major facilitator family protein {ECO:0000313|EMBL:CCX88098.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
L3_060_256G1_scaffold_173_11
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9697..10263)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5G0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL83175.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
L3_060_256G1_scaffold_173_12
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10417..11859)
DNA (1443bp) protein (481aa)
TldD/PmbA family protein n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5EJ96_9BURK
TldD/PmbA family protein {ECO:0000313|EMBL:CCX88096.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
peptidase U62 modulator of DNA gyrase
L3_060_256G1_scaffold_173_13
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11852..12673)
DNA (822bp) protein (274aa)
Hydrolase, carbon-nitrogen family n=2 Tax=Burkholderiales RepID=D9Y5G2_9BURK
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EFL83177.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
predicted amidohydrolase
L3_060_256G1_scaffold_173_14
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12679..16635)
DNA (3957bp) protein (1319aa)
TIGR02099 family protein n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QI40_9BURK
TIGR02099 family protein {ECO:0000313|EMBL:EGG56657.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
hypothetical protein
L3_060_256G1_scaffold_173_15
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16742..19594
DNA (2853bp) protein (951aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
glnE; glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QI41_9BURK
L3_060_256G1_scaffold_173_16
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19630..20613
DNA (984bp) protein (328aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5G5_9BURK
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EFL83180.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
alpha/beta fold family hydrolase
L3_060_256G1_scaffold_173_17
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20660..21235
DNA (576bp) protein (192aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y5G6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX86882.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
L3_060_256G1_scaffold_173_18
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21242..22249
DNA (1008bp) protein (336aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
Ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QI44_9BURK
L3_060_256G1_scaffold_173_19
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22523..23068
DNA (546bp) protein (182aa)
Protein GrpE n=2 Tax=Burkholderiales RepID=D9Y5G8_9BURK
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
grpE; heat shock protein grpe
L3_060_256G1_scaffold_173_20
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23150..25054
DNA (1905bp) protein (635aa)
Chaperone protein DnaK n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QI47_9BURK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
Chaperone protein DnaK
L3_060_256G1_scaffold_173_21
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25177..26337
DNA (1161bp) protein (387aa)
Chaperone protein DnaJ n=3 Tax=Burkholderiales RepID=D9Y5H0_9BURK
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
dnaJ; molecular chaperone DnaJ
L3_060_256G1_scaffold_173_22
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26653..27768
DNA (1116bp) protein (372aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5H1_9BURK
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFL83186.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
secretion protein HlyD
L3_060_256G1_scaffold_173_23
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27789..30878
DNA (3090bp) protein (1030aa)
RND transporter, HAE1 family n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5H2_9BURK
RND transporter, HAE1 family {ECO:0000313|EMBL:EFL83187.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hydrophobe/amphiphile efflux-1 HAE1
L3_060_256G1_scaffold_173_24
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31000..31296)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5H3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL83188.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Transcriptional regulator
L3_060_256G1_scaffold_173_25
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31322..31939)
DNA (618bp) protein (206aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5H4_9BURK
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFL83189.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
transcriptional regulator
L3_060_256G1_scaffold_173_26
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32336..35764
DNA (3429bp) protein (1143aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5H5_9BURK
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:EFL83190.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
peptidase S8
L3_060_256G1_scaffold_173_27
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36089..37081
DNA (993bp) protein (331aa)
Anaerobic C4-dicarboxylate transporter n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5H6_9BURK
Anaerobic C4-dicarboxylate transporter {ECO:0000256|PIRNR:PIRNR004539}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
anaerobic C4-dicarboxylate transporter
L3_060_256G1_scaffold_173_28
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37522..38388)
DNA (867bp) protein (289aa)
pheC; putative cyclohexadienyl dehydratase (EC:4.2.1.51 4.2.1.91)
Putative cyclohexadienyl dehydratase n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5H7_9BURK
Putative cyclohexadienyl dehydratase {ECO:0000313|EMBL:EFL83192.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
L3_060_256G1_scaffold_173_29
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38493..39266)
DNA (774bp) protein (258aa)
RNA pseudouridine synthase {ECO:0000313|EMBL:EFL83193.1}; EC=5.4.99.- {ECO:0000313|EMBL:EFL83193.1};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
tRNA pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5H8_9BURK
L3_060_256G1_scaffold_173_30
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39375..40397)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=D9Y5H9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX85759.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
Displaying items 1-30 of 71 in total

View Taxonomy