ggKbase home page

L3_060_256G1_scaffold_174

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_174_1
Rahnella aquatilis, Rahnella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


46..273
DNA (228bp) protein (76aa)
30S ribosomal protein S18 n=127 Tax=Enterobacteriaceae RepID=RS18_SERP5
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=745277 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Rahnella.;" source="Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC; 105701 / NCIMB 13365 / CIP 78.65).;"
L3_060_256G1_scaffold_174_2
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


313..762
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=8 Tax=Klebsiella RepID=RL9_KLEP3
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1328397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCICRE 14.;"
L3_060_256G1_scaffold_174_3
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

909..1838
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AMJ3_CITK8
Drug/metabolite transporter (DMT) superfamily permease {ECO:0000313|EMBL:KFD05939.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
hypothetical protein
L3_060_256G1_scaffold_174_4
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1886..2530)
DNA (645bp) protein (215aa)
Opacity-associated protein A n=1 Tax=Enterobacter sp. (strain 638) RepID=A4W5T4_ENT38
Putative cell envelope opacity-associated protein A {ECO:0000313|EMBL:KFD05938.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
opacity-associated protein A
L3_060_256G1_scaffold_174_5
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2731..3351
DNA (621bp) protein (207aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9YYK5_9ENTR
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_060_256G1_scaffold_174_6
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3654..5060
DNA (1407bp) protein (469aa)
D-alanine/D-serine/glycine permease n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. CVM 19593 RepID=I9LMA3_SALNE
D-serine/D-alanine/glycine transporter {ECO:0000313|EMBL:KFD05936.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
D-alanine/D-serine/glycine permease
L3_060_256G1_scaffold_174_7
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5190..5615
DNA (426bp) protein (142aa)
Nucleoside triphosphatase NudI {ECO:0000256|HAMAP-Rule:MF_01846}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01846};; Pyrimidine deoxynucleoside triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846}; dCTP diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846}; dTTP diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846}; dUTP diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Nucleoside triphosphatase NudI n=1 Tax=Enterobacter cloacae EcWSU1 RepID=G8LP02_ENTCL
nudI; nucleoside triphosphatase nudI
L3_060_256G1_scaffold_174_8
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5652..6314)
DNA (663bp) protein (221aa)
Iron-sulfur cluster repair protein YtfE n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M7W9_ENTBF
Iron-sulfur cluster repair protein YtfE {ECO:0000256|HAMAP-Rule:MF_01606, ECO:0000256|SAAS:SAAS00010490}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
iron-sulfur cluster repair di-iron protein
L3_060_256G1_scaffold_174_9
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6547..8196
DNA (1650bp) protein (550aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BFQ1_9ENTR
Methyl-accepting chemotaxis protein I {ECO:0000313|EMBL:KFD05933.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
hypothetical protein
L3_060_256G1_scaffold_174_10
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8200..9165)
DNA (966bp) protein (322aa)
Putative membrane protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BFQ2_9ENTR
Putative membrane protein {ECO:0000313|EMBL:KFD05932.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
membrane protein
L3_060_256G1_scaffold_174_11
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9241..10065)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8VS64_9ENTR
AraC family transcriptional regulator {ECO:0000313|EMBL:KFD05931.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
AraC family transcriptional regulator
L3_060_256G1_scaffold_174_12
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10147..10995)
DNA (849bp) protein (283aa)
NADPH-quinone oxidoreductase {ECO:0000313|EMBL:KFD05930.1}; EC=1.6.5.2 {ECO:0000313|EMBL:KFD05930.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Quinone oxidoreductase 2 n=1 Tax=Citrobacter sp. KTE32 RepID=R8VMI7_9ENTR
hypothetical protein
L3_060_256G1_scaffold_174_13
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11080..11487
DNA (408bp) protein (136aa)
Transcriptional regulator n=2 Tax=Citrobacter RepID=R8VMP3_9ENTR
QorR family redox-sensing transcriptional regulator {ECO:0000313|EMBL:KFD05929.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
putative transcriptional regulator
L3_060_256G1_scaffold_174_14
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11558..13501)
DNA (1944bp) protein (648aa)
2',3'-cyclic-nucleotide 2'-phosphodiesterase {ECO:0000313|EMBL:KFD05928.1}; EC=3.-.-.- {ECO:0000313|EMBL:KFD05928.1};; EC=3.1.4.16 {ECO:0000313|EMBL:KFD05928.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AMI2_CITK8
cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein
L3_060_256G1_scaffold_174_15
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13848..14594
DNA (747bp) protein (249aa)
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:KFD05927.1}; EC=3.1.3.7 {ECO:0000313|EMBL:KFD05927.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
3'(2'),5'-bisphosphate nucleotidase CysQ n=3 Tax=Klebsiella RepID=H3LGL1_KLEOX
adenosine-3'(2'),5'-bisphosphate nucleotidase
L3_060_256G1_scaffold_174_16
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14657..15511
DNA (855bp) protein (285aa)
Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V210_ESCHE
Putative D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:GAB52018.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
L3_060_256G1_scaffold_174_17
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15500..16054)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Enterobacter aerogenes (strain ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006) RepID=G0E1A7_ENTAK
YtfJ family protein {ECO:0000313|EMBL:KFD05926.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
hypothetical protein
L3_060_256G1_scaffold_174_18
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16378..16584
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TN48_CITRI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG89991.1}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
L3_060_256G1_scaffold_174_19
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16660..18003)
DNA (1344bp) protein (448aa)
Putative membrane protein {ECO:0000313|EMBL:KFD05924.1}; EC=1.1.-.- {ECO:0000313|EMBL:KFD05924.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
CBS domain-containing protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M7R1_ENTBF
CBS domain-containing protein
L3_060_256G1_scaffold_174_20
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18150..19694)
DNA (1545bp) protein (515aa)
Major Facilitator Superfamily transporter n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TN50_CITRI
Rhamnogalacturonide transporter {ECO:0000313|EMBL:KFD05923.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
major Facilitator Superfamily transporter
L3_060_256G1_scaffold_174_21
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19785..20807)
DNA (1023bp) protein (341aa)
Putative dehydrogenase {ECO:0000313|EMBL:KFD05922.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFD05922.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Putative oxidoreductase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TN51_CITRI
oxidoreductase
L3_060_256G1_scaffold_174_22
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20820..21887)
DNA (1068bp) protein (356aa)
Oxidoreductase domain protein {ECO:0000313|EMBL:KFD05921.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFD05921.1};; Flags: Fragment;; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Putative dehydrogenase n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M9J1_ENTBF
putative dehydrogenase
L3_060_256G1_scaffold_174_23
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21890..23068)
DNA (1179bp) protein (393aa)
Oxidoreductase {ECO:0000313|EMBL:KFC98924.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC98924.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
oxidoreductase n=1 Tax=Enterobacter mori RepID=UPI000237CB01
oxidoreductase
L3_060_256G1_scaffold_174_24
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23088..24242)
DNA (1155bp) protein (385aa)
Putative dehydrogenase n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0MB92_ENTBF
putative dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AGB79941.1}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
L3_060_256G1_scaffold_174_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24345..25487
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V3D3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF09524.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
transcriptional regulator
L3_060_256G1_scaffold_174_26
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25489..26127)
DNA (639bp) protein (213aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S2M8_ENTAL
peptide methionine sulfoxide reductase MsrA
L3_060_256G1_scaffold_174_27
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26397..28130
DNA (1734bp) protein (578aa)
Outer membrane protein n=1 Tax=Enterobacter sp. MGH 14 RepID=U7CWP9_9ENTR
YtfM family protein {ECO:0000313|EMBL:KFC98920.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
membrane protein
L3_060_256G1_scaffold_174_28
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28127..31903
DNA (3777bp) protein (1259aa)
Uncharacterized protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0MB84_ENTBF
YtfN family protein {ECO:0000313|EMBL:KFC98919.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
hypothetical protein
L3_060_256G1_scaffold_174_29
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31906..32250
DNA (345bp) protein (115aa)
AIG2 family protein n=9 Tax=Klebsiella RepID=G8WHF4_KLEOK
gamma-glutamylcyclotransferase
Gamma-glutamylcyclotransferase ytfP {ECO:0000313|EMBL:EWF77584.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
L3_060_256G1_scaffold_174_30
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32398..32925)
DNA (528bp) protein (176aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Shigella flexneri 1235-66 RepID=I6F4Y8_SHIFL
Displaying items 1-30 of 93 in total

View Taxonomy