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L3_060_256G1_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_175_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(145..1110)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W170_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38434.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Transketolase domain protein
L3_060_256G1_scaffold_175_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1126..1977)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0G0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38435.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Transketolase domain protein
L3_060_256G1_scaffold_175_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2519..3277
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1P5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38436.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
iolR; HTH-type transcriptional regulator IolR
L3_060_256G1_scaffold_175_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3290..4165)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38437.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
AraC family transcriptional regulator
L3_060_256G1_scaffold_175_5
Mageeibacillus indolicus, Mageeibacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4417..5238
DNA (822bp) protein (274aa)
Myo-inositol catabolism protein IolB n=1 Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3QZL2_CLOB3
iolB; myo-inositol catabolism protein
Myo-inositol catabolism protein IolB {ECO:0000313|EMBL:ADC90543.1}; TaxID=699246 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus.;" source="Mageeibacillus indolicus (strain UPII9-5) (Clostridiales genomosp.; BVAB3 (strain UPII9-5)).;"
L3_060_256G1_scaffold_175_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5285..7255
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W184_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38439.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
thiamine pyrophosphate protein, central region
L3_060_256G1_scaffold_175_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7370..8710)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38423.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_060_256G1_scaffold_175_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8875..9819
DNA (945bp) protein (315aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L-lactate dehydrogenase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5K8_9CLOT
L-lactate dehydrogenase
L3_060_256G1_scaffold_175_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9872..10195)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W512_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39990.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_060_256G1_scaffold_175_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10303..10698)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W637_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39991.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_060_256G1_scaffold_175_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10767..11378)
DNA (612bp) protein (204aa)
GTPase (EC:3.6.1.-)
Probable GTP-binding protein EngB n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W640_9CLOT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_060_256G1_scaffold_175_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11398..13821)
DNA (2424bp) protein (808aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
lon; Lon protease (EC:3.4.21.53)
Lon protease n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8WA34_9CLOT
L3_060_256G1_scaffold_175_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13983..15257)
DNA (1275bp) protein (425aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W576_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ATP-dependent Clp protease ATP-binding subunit clpX
L3_060_256G1_scaffold_175_14
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(15383..15967)
DNA (585bp) protein (195aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YCW2_9FIRM
L3_060_256G1_scaffold_175_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16108..17415)
DNA (1308bp) protein (436aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
tig; Trigger factor (EC:5.2.1.8)
Trigger factor n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W518_9CLOT
L3_060_256G1_scaffold_175_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17502..18203)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W644_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ40001.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
metallophosphoesterase
L3_060_256G1_scaffold_175_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18217..19710)
DNA (1494bp) protein (498aa)
thrC; Threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8WA38_9CLOT
Threonine synthase {ECO:0000313|EMBL:EOQ40002.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_060_256G1_scaffold_175_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19725..20687)
DNA (963bp) protein (321aa)
membrane dipeptidase (EC:3.4.13.19)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W580_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ40003.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_060_256G1_scaffold_175_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20700..21050)
DNA (351bp) protein (117aa)
UPF0102 protein HMPREF1526_00702 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5P1_9CLOT
UPF0102 protein HMPREF1526_00702 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
conserved hypothetical protein TIGR00252
L3_060_256G1_scaffold_175_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21047..21667)
DNA (621bp) protein (207aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
RNase HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W522_9CLOT
L3_060_256G1_scaffold_175_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21648..22538)
DNA (891bp) protein (297aa)
Ribosome biogenesis GTPase A n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W647_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative GTP-binding protein
L3_060_256G1_scaffold_175_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22535..23113)
DNA (579bp) protein (193aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8WA42_9CLOT
L3_060_256G1_scaffold_175_23
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(23301..24515)
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 id=4341302 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
fucose permease
Tax=BJP_08E140C01_Spirochaeta_53_29
L3_060_256G1_scaffold_175_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24592..24933)
DNA (342bp) protein (114aa)
50S ribosomal protein L19 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W585_9CLOT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rplS; 50S ribosomal protein L19
L3_060_256G1_scaffold_175_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25238..26551
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46728.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
cyclomaltodextrinase
L3_060_256G1_scaffold_175_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26625..27566)
DNA (942bp) protein (314aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Tagatose-6-phosphate kinase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W469_9CLOT
1-phosphofructokinase
L3_060_256G1_scaffold_175_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27749..28486)
DNA (738bp) protein (246aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3K4_9CLOT
L3_060_256G1_scaffold_175_28
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28483..28986)
DNA (504bp) protein (168aa)
Ribosome maturation factor RimM n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4P4_9CLOT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rimM; Ribosome maturation factor RimM
L3_060_256G1_scaffold_175_29
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29072..29302)
DNA (231bp) protein (77aa)
UPF0109 protein HMPREF1526_00181 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8M2_9CLOT
UPF0109 protein HMPREF1526_00181 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L3_060_256G1_scaffold_175_30
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29321..29560)
DNA (240bp) protein (80aa)
30S ribosomal protein S16 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3T7_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rpsP; 30S ribosomal protein S16
Displaying items 1-30 of 77 in total

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