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L3_060_256G1_scaffold_184

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_184_1
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..445)
DNA (444bp) protein (148aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Probable transaldolase n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ALG8_9FIRM
transaldolase
L3_060_256G1_scaffold_184_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(459..2486)
DNA (2028bp) protein (676aa)
PRD domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N881_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93820.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcription antiterminator
L3_060_256G1_scaffold_184_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2502..3557)
DNA (1056bp) protein (352aa)
Phosphotransferase system, EIIC n=3 Tax=Erysipelotrichaceae RepID=B0N882_9FIRM
PTS system, Fru family, IIC component {ECO:0000313|EMBL:EHM93819.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PTS system fructose subfamily transporter subunit IIC
L3_060_256G1_scaffold_184_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3569..3883)
DNA (315bp) protein (105aa)
Fructose-like phosphotransferase enzyme IIB component 2 {ECO:0000313|EMBL:EDS18021.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS18021.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Fructose-like phosphotransferase enzyme IIB component 2 n=3 Tax=Erysipelotrichaceae RepID=B0N883_9FIRM
PTS system, fructose-specific, IIB subunit
L3_060_256G1_scaffold_184_5
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3896..4363)
DNA (468bp) protein (156aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Erysipelotrichaceae RepID=B0N884_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EDS18022.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2
L3_060_256G1_scaffold_184_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4369..5637)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N885_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18023.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L3_060_256G1_scaffold_184_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5912..7309)
DNA (1398bp) protein (466aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Erysipelotrichaceae RepID=B0N886_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33438.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ROK family protein
L3_060_256G1_scaffold_184_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7563..8051)
DNA (489bp) protein (163aa)
bglF.4; PTS system beta-glucosides-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system, glucose subfamily, IIA component n=2 Tax=Coprobacillus RepID=G9QXK1_9FIRM
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EHQ46046.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_060_256G1_scaffold_184_9
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8072..9481)
DNA (1410bp) protein (470aa)
Phosphotransferase system, EIIC n=2 Tax=Erysipelotrichaceae RepID=B0N888_9FIRM
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EDS18026.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
PTS system beta-glucoside-specific transporter subunit IIABC
L3_060_256G1_scaffold_184_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9493..10332)
DNA (840bp) protein (280aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=C3RHS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33447.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
licT; BglG family transcriptional antiterminator
L3_060_256G1_scaffold_184_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10352..11800)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHS4_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EDS18028.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glycosyl hydrolase family protein
L3_060_256G1_scaffold_184_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12229..12465)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=T5LEV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93810.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_060_256G1_scaffold_184_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12477..12647)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N893_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18031.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_060_256G1_scaffold_184_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12820..12927)
DNA (108bp) protein (36aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N894_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33464.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_060_256G1_scaffold_184_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13063..14199)
DNA (1137bp) protein (379aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=4 Tax=Coprobacillus RepID=C3RHS0_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCZ33466.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L3_060_256G1_scaffold_184_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14319..14813)
DNA (495bp) protein (165aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RHR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33468.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_060_256G1_scaffold_184_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14826..15806)
DNA (981bp) protein (327aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N897_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46053.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
MviM protein
L3_060_256G1_scaffold_184_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15807..16748)
DNA (942bp) protein (314aa)
Oxidoreductase, NAD-binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N898_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33476.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Predicted dehydrogenases and related proteins
L3_060_256G1_scaffold_184_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16884..17612)
DNA (729bp) protein (243aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9QXJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33478.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_060_256G1_scaffold_184_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17822..18832
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QXJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93803.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Putative GTPases (G3E family)
L3_060_256G1_scaffold_184_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18832..19773
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=C3RHR4_9FIRM
Putative TIGR03943 family protein {ECO:0000313|EMBL:EDS18039.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
G3E family GTPase-like protein
L3_060_256G1_scaffold_184_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19817..20119)
DNA (303bp) protein (101aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Erysipelotrichaceae RepID=B0N8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33485.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_060_256G1_scaffold_184_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20119..21351)
DNA (1233bp) protein (411aa)
PTS system, lactose/cellobiose family IIC subunit (EC:2.7.1.69)
PTS system, lactose/cellobiose family IIC component n=2 Tax=Erysipelotrichaceae RepID=B0N8A3_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_060_256G1_scaffold_184_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21364..23358)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=H1AM99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46060.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
NADH:flavin oxidoreductase
L3_060_256G1_scaffold_184_25
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23505..25406
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RKR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33492.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
HTH domain protein
L3_060_256G1_scaffold_184_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25439..26134)
DNA (696bp) protein (232aa)
biotin operon repressor (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=4 Tax=Erysipelotrichaceae RepID=B0N8A7_9FIRM
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:CCZ33493.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_060_256G1_scaffold_184_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26206..28878)
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AMA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46063.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
type III restriction endonuclease subunit R
L3_060_256G1_scaffold_184_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29015..29887
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family n=5 Tax=Erysipelotrichaceae RepID=B0N8A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33495.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transcriptional regulator, AraC family
L3_060_256G1_scaffold_184_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29973..31928
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RKT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33497.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_060_256G1_scaffold_184_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31945..33870
DNA (1926bp) protein (642aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N8B1_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDS18049.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
Displaying items 1-30 of 77 in total

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