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L3_060_256G1_scaffold_206

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_206_1
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..978)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R7AIN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60698.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
carbon starvation protein
L3_060_256G1_scaffold_206_2
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1316..2077
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B6L8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60711.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
arginase
L3_060_256G1_scaffold_206_3
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2300..2755
DNA (456bp) protein (152aa)
Molecular chaperone (Small heat shock protein) n=2 Tax=Firmicutes RepID=R6PR58_9FIRM
Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:CDD60712.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Molecular chaperone (small heat shock protein)
L3_060_256G1_scaffold_206_4
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

2844..3296
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QXZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC26872.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_256G1_scaffold_206_5
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(3467..5074)
DNA (1608bp) protein (536aa)
Conserved domain protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PTL1_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC26870.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_256G1_scaffold_206_6
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5523..5777
DNA (255bp) protein (85aa)
Sporulation transcriptional regulator SpoIIID n=2 Tax=Firmicutes RepID=R6PR56_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CDD61498.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
sporulation transcriptional regulator SpoIIID
L3_060_256G1_scaffold_206_7
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6141..6773)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8Z7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61497.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_206_8
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6924..7307
DNA (384bp) protein (128aa)
Desulfoferrodoxin (EC:1.15.1.2)
Desulfoferrodoxin n=1 Tax=Clostridium sp. CAG:505 RepID=R7B884_9CLOT
Desulfoferrodoxin {ECO:0000313|EMBL:CDD61496.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_206_9
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7434..9959
DNA (2526bp) protein (842aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Clostridium sp. CAG:505 RepID=R7ASJ7_9CLOT
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CDD61495.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_060_256G1_scaffold_206_10
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(10209..11621)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q7T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC26861.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
putative efflux protein, MATE family
L3_060_256G1_scaffold_206_11
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11600..12073)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6Q1C0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD61493.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Transcriptional regulators
L3_060_256G1_scaffold_206_12
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12343..12966)
DNA (624bp) protein (208aa)
Maf-like protein BN684_01343 n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8B2_9CLOT
Maf-like protein BN684_01343 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
maf protein
L3_060_256G1_scaffold_206_13
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

13183..14367
DNA (1185bp) protein (395aa)
Arabinose efflux permease n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PTJ3_9FIRM
Arabinose efflux permease {ECO:0000313|EMBL:CDC26855.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
major facilitator superfamily protein
L3_060_256G1_scaffold_206_14
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14444..14986)
DNA (543bp) protein (181aa)
Rubrerythrin n=1 Tax=Clostridium sp. CAG:505 RepID=R7ASJ3_9CLOT
Rubrerythrin {ECO:0000313|EMBL:CDD61490.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
rubrerythrin
L3_060_256G1_scaffold_206_15
unknown

Not on your lists

15148..15342
DNA (195bp) protein (65aa)

This feature has no annotations

L3_060_256G1_scaffold_206_16
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(15339..16247)
DNA (909bp) protein (303aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
argF; Ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q7S5_9FIRM
L3_060_256G1_scaffold_206_17
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16268..17440)
DNA (1173bp) protein (391aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Acetylornithine aminotransferase n=1 Tax=Clostridium sp. CAG:505 RepID=R7AL05_9CLOT
acetylornithine and succinylornithine aminotransferase
L3_060_256G1_scaffold_206_18
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17462..18316)
DNA (855bp) protein (285aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
argB; Acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B879_9CLOT
L3_060_256G1_scaffold_206_19
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(18333..19547)
DNA (1215bp) protein (405aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QXW9_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Arginine biosynthesis bifunctional protein ArgJ
L3_060_256G1_scaffold_206_20
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(19580..20509)
DNA (930bp) protein (310aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q7S1_9FIRM
L3_060_256G1_scaffold_206_21
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21020..22414)
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8A8_9CLOT
L3_060_256G1_scaffold_206_22
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22537..23523)
DNA (987bp) protein (329aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Clostridium sp. CAG:505 RepID=R7AL00_9CLOT
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase
L3_060_256G1_scaffold_206_23
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23532..24353)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BA50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61482.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Predicted amidohydrolase
L3_060_256G1_scaffold_206_24
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24630..25814)
DNA (1185bp) protein (395aa)
Putative amino acid aminotransferase n=2 Tax=Firmicutes RepID=R6QXW5_9FIRM
Putative amino acid aminotransferase {ECO:0000313|EMBL:CDD61620.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
amino acid aminotransferase
L3_060_256G1_scaffold_206_25
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(26393..27577)
DNA (1185bp) protein (395aa)
Putative amino acid aminotransferase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q7R5_9FIRM
Putative amino acid aminotransferase {ECO:0000313|EMBL:CDC26841.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
amino acid aminotransferase
L3_060_256G1_scaffold_206_26
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28209..28742
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6PTH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD61618.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
XRE family transcriptional regulator
L3_060_256G1_scaffold_206_27
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

28773..30344
DNA (1572bp) protein (524aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Spermidine/putrescine ABC transporter ATP-binding protein n=2 Tax=Firmicutes RepID=R6PR28_9FIRM
spermidine/putrescine ABC transporter ATP-binding protein
L3_060_256G1_scaffold_206_28
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30362..31201
DNA (840bp) protein (280aa)
ABC transporter permease protein n=2 Tax=Firmicutes RepID=R6PTH0_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDD61616.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_060_256G1_scaffold_206_29
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

31205..31999
DNA (795bp) protein (265aa)
Spermidine/putrescine ABC transporter spermidine/putrescine-binding protein n=2 Tax=Firmicutes RepID=R6Q1A1_9FIRM
Spermidine/putrescine ABC transporter spermidine/putrescine-binding protein {ECO:0000313|EMBL:CDC26834.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
ABC-type spermidine/putrescine transport system, permease component II
L3_060_256G1_scaffold_206_30
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31996..33078
DNA (1083bp) protein (361aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6QXV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD61614.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Spermidine/putrescine-binding periplasmic protein
Displaying items 1-30 of 84 in total

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