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L3_060_256G1_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_217_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(205..969)
DNA (765bp) protein (255aa)
Predicted amidophosphoribosyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYJ2_9FIRM
Predicted amidophosphoribosyltransferases
Predicted amidophosphoribosyltransferases {ECO:0000313|EMBL:CBK99091.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(969..3065)
DNA (2097bp) protein (699aa)
S-layer homology domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYJ1_9FIRM
S-layer homology domain.
S-layer homology domain {ECO:0000313|EMBL:CBK99090.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3286..4488)
DNA (1203bp) protein (401aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYJ0_9FIRM
ABC-type antimicrobial peptide transport system, permease component
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:CBK99089.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4488..5234)
DNA (747bp) protein (249aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK99088.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBK99088.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYI9_9FIRM
L3_060_256G1_scaffold_217_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5246..6871)
DNA (1626bp) protein (542aa)
RND family efflux transporter, MFP subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYI8_9FIRM
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:CBK99087.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7077..7481)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYI7_9FIRM
Protein of unknown function (DUF1312).
Uncharacterized protein {ECO:0000313|EMBL:CBK99086.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7478..9397)
DNA (1920bp) protein (640aa)
flavocytochrome c (EC:1.3.99.1)
Flavocytochrome c {ECO:0000313|EMBL:CBK99085.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CBK99085.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Flavocytochrome c n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYI6_9FIRM
L3_060_256G1_scaffold_217_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9508..10506)
DNA (999bp) protein (333aa)
Uncharacterized protein n=4 Tax=Faecalibacterium prausnitzii RepID=C7H9C8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99084.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10524..11225)
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S805_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99083.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_10
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11448..12704)
DNA (1257bp) protein (419aa)
Transporter major facilitator family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q3C0_9FIRM
Transporter major facilitator family protein {ECO:0000313|EMBL:CDC31203.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Sugar phosphate permease
L3_060_256G1_scaffold_217_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12963..14204
DNA (1242bp) protein (414aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase {ECO:0000313|EMBL:CBK99082.1}; EC=6.1.1.21 {ECO:0000313|EMBL:CBK99082.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Histidyl-tRNA synthetase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYI3_9FIRM
L3_060_256G1_scaffold_217_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14282..15571)
DNA (1290bp) protein (430aa)
Predicted membrane protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYI2_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK99081.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15882..16694)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYI1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99080.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16886..17974)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97112.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_060_256G1_scaffold_217_15
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17998..20139)
DNA (2142bp) protein (714aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R4P8_9FIRM
L3_060_256G1_scaffold_217_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20170..20718)
DNA (549bp) protein (183aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CBK99079.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CBK99079.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Hypoxanthine phosphoribosyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYI0_9FIRM
L3_060_256G1_scaffold_217_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20715..22181)
DNA (1467bp) protein (489aa)
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYH9_9FIRM
L3_060_256G1_scaffold_217_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22181..23578)
DNA (1398bp) protein (466aa)
primary replicative DNA helicase (EC:3.6.1.-)
Primary replicative DNA helicase {ECO:0000313|EMBL:CBK99077.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK99077.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Primary replicative DNA helicase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYH8_9FIRM
L3_060_256G1_scaffold_217_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23665..24120)
DNA (456bp) protein (152aa)
50S ribosomal protein L9 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYH7_9FIRM
LSU ribosomal protein L9P
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24201..25304)
DNA (1104bp) protein (368aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase {ECO:0000313|EMBL:CBK99075.1}; EC=5.4.99.9 {ECO:0000313|EMBL:CBK99075.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
UDP-galactopyranose mutase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYH6_9FIRM
L3_060_256G1_scaffold_217_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25304..27280)
DNA (1977bp) protein (659aa)
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYH5_9FIRM
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain {ECO:0000313|EMBL:CBK99074.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27338..29125)
DNA (1788bp) protein (596aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYH4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99073.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29528..29992
DNA (465bp) protein (155aa)
RNase HI (EC:3.1.26.4)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Ribonuclease H n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYH3_9FIRM
L3_060_256G1_scaffold_217_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29989..30507
DNA (519bp) protein (173aa)
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYH2_9FIRM
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain {ECO:0000313|EMBL:CBK99071.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30603..31007)
DNA (405bp) protein (135aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Methylglyoxal synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYH1_9FIRM
L3_060_256G1_scaffold_217_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31154..33340)
DNA (2187bp) protein (729aa)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYH0_9FIRM
Cell division protein FtsI/penicillin-binding protein 2
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CBK99069.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33368..33901)
DNA (534bp) protein (178aa)
Rod shape-determining protein MreD n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYG9_9FIRM
rod shape-determining protein MreD.
Rod shape-determining protein MreD {ECO:0000313|EMBL:CBK99068.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_28
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33914..34744)
DNA (831bp) protein (277aa)
Cell shape-determining protein MreC n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q8C4_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Cell shape-determining protein
L3_060_256G1_scaffold_217_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34874..35896)
DNA (1023bp) protein (341aa)
Rod shape-determining protein MreB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYG8_9FIRM
rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:CBK99067.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_217_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36090..36641)
DNA (552bp) protein (184aa)
Maf-like protein FP2_15940 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYG7_9FIRM
MAF protein
Maf-like protein FP2_15940 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 75 in total

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