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L3_060_256G1_scaffold_228

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_228_1
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..507)
DNA (507bp) protein (169aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M3H0_9FIRM
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:EOS62427.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Electron transfer flavoprotein, alpha subunit
L3_060_256G1_scaffold_228_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(526..1326)
DNA (801bp) protein (267aa)
Electron transfer flavoprotein n=1 Tax=Oscillibacter sp. KLE 1745 RepID=U2R8F6_9FIRM
Electron transfer flavoprotein {ECO:0000313|EMBL:ERK65161.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
etfB; electron transfer flavoprotein beta subunit
L3_060_256G1_scaffold_228_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1347..2489)
DNA (1143bp) protein (381aa)
acdA; acyl-CoA dehydrogenase (EC:1.3.99.-)
Butyryl-CoA dehydrogenase n=3 Tax=Oscillibacter RepID=U2SSZ2_9FIRM
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:ERK65657.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_060_256G1_scaffold_228_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2528..3364)
DNA (837bp) protein (279aa)
hbd; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Oscillibacter RepID=U2RSL4_9FIRM
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ERK65658.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_060_256G1_scaffold_228_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3662..4435)
DNA (774bp) protein (258aa)
Hydrolase, alpha/beta domain protein n=2 Tax=Oscillibacter RepID=U2RAU2_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ERK65659.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
L3_060_256G1_scaffold_228_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4620..5657
DNA (1038bp) protein (346aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Oscillibacter RepID=U2QJ70_9FIRM
L3_060_256G1_scaffold_228_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5762..6112)
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=2 Tax=Oscillibacter RepID=U2Q1A4_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rplT; 50S ribosomal protein L20
L3_060_256G1_scaffold_228_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6145..6342)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Oscillibacter RepID=U2QK00_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpmI; 50S ribosomal protein L35
L3_060_256G1_scaffold_228_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6376..6882)
DNA (507bp) protein (169aa)
Translation initiation factor IF-3 n=2 Tax=Oscillibacter RepID=U2RAU8_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
infC; translation initiation factor IF-3
L3_060_256G1_scaffold_228_10
unknown

Not on your lists

7195..7308
DNA (114bp) protein (38aa)

This feature has no annotations

L3_060_256G1_scaffold_228_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7372..9012)
DNA (1641bp) protein (547aa)
Glycosyl hydrolase family 25 n=2 Tax=Oscillibacter RepID=U2R9R8_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:ERK65611.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative lysozyme
L3_060_256G1_scaffold_228_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9280..9708
DNA (429bp) protein (143aa)
Sigma-70 region 2 n=2 Tax=Oscillibacter RepID=U2QDV3_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:ERK65613.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
RNA polymerase ECF subfamily sigma factor
L3_060_256G1_scaffold_228_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9705..10619
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QXX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65614.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_060_256G1_scaffold_228_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10677..12038)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QRR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65615.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_060_256G1_scaffold_228_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12025..12372)
DNA (348bp) protein (116aa)
Transcriptional regulator, PadR family n=2 Tax=Oscillibacter RepID=U2R9S3_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ERK65616.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative transcriptional regulator
L3_060_256G1_scaffold_228_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12488..14326)
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
glmS; glucosamine-6-phosphate synthase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Oscillibacter RepID=U2QWY9_9FIRM
L3_060_256G1_scaffold_228_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14697..15164)
DNA (468bp) protein (156aa)
bltD; spermine/spermidine acetyltransferase (EC:2.3.1.57)
Putative diamine N-acetyltransferase n=2 Tax=Oscillibacter RepID=U2QDU8_9FIRM
Putative diamine N-acetyltransferase {ECO:0000313|EMBL:ERK65619.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_060_256G1_scaffold_228_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15314..15997
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QRR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65620.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_060_256G1_scaffold_228_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15994..16374
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R9S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65621.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_060_256G1_scaffold_228_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16381..16839)
DNA (459bp) protein (153aa)
Transcriptional repressor NrdR n=2 Tax=Oscillibacter RepID=U2SEC2_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
nrdR; transcriptional regulator NrdR
L3_060_256G1_scaffold_228_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17011..17532)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QWY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65623.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_060_256G1_scaffold_228_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17603..18097)
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QDU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65624.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_060_256G1_scaffold_228_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18268..18636)
DNA (369bp) protein (123aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
mRNA interferase n=2 Tax=Oscillibacter RepID=U2QRR8_9FIRM
endoribonuclease
L3_060_256G1_scaffold_228_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18826..19992)
DNA (1167bp) protein (389aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Alanine racemase n=2 Tax=Oscillibacter RepID=U2R9T2_9FIRM
alanine racemase
L3_060_256G1_scaffold_228_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20052..20657)
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QX10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65584.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_060_256G1_scaffold_228_26
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20676..22217)
DNA (1542bp) protein (514aa)
YjeF domain protein n=3 Tax=Oscillibacter RepID=U2QRN5_9FIRM
YjeF domain protein {ECO:0000313|EMBL:ERK65585.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_060_256G1_scaffold_228_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22368..23945
DNA (1578bp) protein (526aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R5K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65586.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_060_256G1_scaffold_228_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24354..25379
DNA (1026bp) protein (342aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
pheS; phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Oscillibacter RepID=U2SE40_9FIRM
L3_060_256G1_scaffold_228_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25596..28316
DNA (2721bp) protein (907aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
pheT; phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=2 Tax=Oscillibacter RepID=U2R4M0_9FIRM
L3_060_256G1_scaffold_228_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28659..28904
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QLQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65590.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
Displaying items 1-30 of 88 in total

View Taxonomy