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L3_060_256G1_scaffold_237

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_237_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..514
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBG1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02174.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_237_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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770..967
DNA (198bp) protein (66aa)
DNA binding domain, excisionase family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KB91_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBL02104.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_237_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1061..2236
DNA (1176bp) protein (392aa)
Site-specific recombinase XerD n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2I3_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL00482.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_4
unknown

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comp(2307..2816)
DNA (510bp) protein (170aa)

This feature has no annotations

L3_060_256G1_scaffold_237_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2979..4346
DNA (1368bp) protein (456aa)
Na+-driven multidrug efflux pump n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2I2_9FIRM
Na+-driven multidrug efflux pump
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:CBL00481.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4405..4587
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2I1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00480.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4728..5207)
DNA (480bp) protein (160aa)
Transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2I0_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL00479.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_8
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5307..6986)
DNA (1680bp) protein (560aa)
Na+/H+ antiporter family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R7Z8_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:CDC30572.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
transporter, NhaC family (TC 2.A.35)
L3_060_256G1_scaffold_237_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7380..7766)
DNA (387bp) protein (129aa)
Thioesterase superfamily n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2H9_9FIRM
Thioesterase superfamily
Thioesterase superfamily {ECO:0000313|EMBL:CBL00478.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7944..8696
DNA (753bp) protein (251aa)
Integral membrane protein (Intg_mem_TP0381) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2H8_9FIRM
Integral membrane protein (intg_mem_TP0381).
Integral membrane protein (Intg_mem_TP0381) {ECO:0000313|EMBL:CBL00477.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8927..9265
DNA (339bp) protein (113aa)
Transcriptional regulator, ArsR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2H7_9FIRM
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CBL00476.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9341..9562
DNA (222bp) protein (74aa)
Heavy-metal-associated domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2H6_9FIRM
Heavy-metal-associated domain.
Heavy-metal-associated domain {ECO:0000313|EMBL:CBL00475.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9797..11680
DNA (1884bp) protein (628aa)
Cadmium-exporting ATPase {ECO:0000313|EMBL:EEU98191.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EEU98191.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-exporting ATPase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1I1_9FIRM
L3_060_256G1_scaffold_237_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11796..12011
DNA (216bp) protein (72aa)
Predicted branched-chain amino acid permease (Azaleucine resistance) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2H4_9FIRM
Predicted branched-chain amino acid permease (azaleucine resistance)
Predicted branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:CBL00473.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11986..12996)
DNA (1011bp) protein (337aa)
asparaginase (EC:3.5.1.1)
Asparaginase {ECO:0000313|EMBL:CBL00472.1}; EC=3.5.1.1 {ECO:0000313|EMBL:CBL00472.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Asparaginase n=2 Tax=root RepID=D4K2H3_9FIRM
L3_060_256G1_scaffold_237_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13668..14525
DNA (858bp) protein (286aa)
Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase {ECO:0000313|EMBL:CBL00470.1}; EC=1.8.1.9 {ECO:0000313|EMBL:CBL00470.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Thioredoxin reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2H1_9FIRM
L3_060_256G1_scaffold_237_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14532..15236
DNA (705bp) protein (235aa)
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2H0_9FIRM
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases {ECO:0000313|EMBL:CBL00469.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15450..15923)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2G9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00468.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15951..16913)
DNA (963bp) protein (321aa)
CobW/HypB/UreG, nucleotide-binding domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2G8_9FIRM
CobW/HypB/UreG, nucleotide-binding domain.
CobW/HypB/UreG, nucleotide-binding domain {ECO:0000313|EMBL:CBL00467.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16938..18176)
DNA (1239bp) protein (413aa)
CobW/P47K family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6M4_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:EDP22937.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Putative GTPases (G3E family)
L3_060_256G1_scaffold_237_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18500..20299
DNA (1800bp) protein (600aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CBL00465.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CBL00465.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Xaa-Pro aminopeptidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2G6_9FIRM
L3_060_256G1_scaffold_237_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20341..21222)
DNA (882bp) protein (294aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2G5_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL00464.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Glycosyltransferases involved in cell wall biogenesis
L3_060_256G1_scaffold_237_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21275..22096
DNA (822bp) protein (274aa)
Response regulator of the LytR/AlgR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2G4_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBL00463.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22133..22783)
DNA (651bp) protein (217aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2G3_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CBL00462.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22919..24091
DNA (1173bp) protein (391aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2G2_9FIRM
Predicted esterase of the alpha-beta hydrolase superfamily
Predicted esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:CBL00461.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24088..25698
DNA (1611bp) protein (537aa)
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) (EC:2.7.3.9)
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) {ECO:0000313|EMBL:CBL00460.1}; EC=2.7.3.9 {ECO:0000313|EMBL:CBL00460.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2G1_9FIRM
L3_060_256G1_scaffold_237_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25761..25982
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2G0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00459.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25979..26248
DNA (270bp) protein (90aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2F9_9FIRM
addiction module toxin, RelE/StbE family
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:CBL00458.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_237_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26302..27045)
DNA (744bp) protein (248aa)
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2F8_9FIRM
L3_060_256G1_scaffold_237_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27130..28044)
DNA (915bp) protein (305aa)
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Ribosomal protein L11 methyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2F7_9FIRM
Displaying items 1-30 of 126 in total

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