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L3_060_256G1_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_239_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..404)
DNA (402bp) protein (134aa)
ABC transporter, substrate-binding , aliphatic sulfonates family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D926_CLODI
ABC transporter, substrate-binding , aliphatic sulfonates family protein {ECO:0000313|EMBL:EQF23367.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
ABC transporter substrate-binding protein
L3_060_256G1_scaffold_239_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(557..1366)
DNA (810bp) protein (270aa)
ABC-type transport system, sulfonate-family ATP-binding protein {ECO:0000313|EMBL:CCK91769.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCK91769.1};; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T20.;"
ABC transporter, ATP-binding protein n=6 Tax=Clostridium difficile RepID=D5Q8G3_CLODI
ABC transporter ATP-binding protein
L3_060_256G1_scaffold_239_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1359..2144)
DNA (786bp) protein (262aa)
Binding--dependent transport system inner membrane component family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D680_CLODI
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQF23384.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
ssuC2; ABC-type transport system, sulfonate-familypermease
L3_060_256G1_scaffold_239_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2145..2774)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3DA88_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF23351.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_060_256G1_scaffold_239_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3165..3944)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MKU2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF55431.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_060_256G1_scaffold_239_6
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4024..5997)
DNA (1974bp) protein (658aa)
pulA; pullulanase PulA (EC:3.2.1.41)
Pullulanase PulA {ECO:0000313|EMBL:AGF55430.1}; EC=3.2.1.41 {ECO:0000313|EMBL:AGF55430.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Pullulanase PulA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LR85_9CLOT
L3_060_256G1_scaffold_239_7
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6021..7361)
DNA (1341bp) protein (447aa)
Glycosidase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MBX2_9CLOT
glycosidase
Glycosidase {ECO:0000313|EMBL:AGF55429.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_060_256G1_scaffold_239_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7763..9001
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VRW1_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK46454.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
L3_060_256G1_scaffold_239_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9219..9794
DNA (576bp) protein (192aa)
UPI0003D5FD3E related cluster n=1 Tax=unknown RepID=UPI0003D5FD3E
Uncharacterized protein {ECO:0000313|EMBL:ETI90889.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_060_256G1_scaffold_239_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9899..10462)
DNA (564bp) protein (188aa)
UPI0003D5F22B related cluster n=1 Tax=unknown RepID=UPI0003D5F22B
Chromate transport protein {ECO:0000313|EMBL:ETI90890.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
chromate transporter
L3_060_256G1_scaffold_239_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10459..11001)
DNA (543bp) protein (181aa)
Chromate transport protein n=4 Tax=Clostridium butyricum RepID=B1QZM9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33643.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
chromate transporter
L3_060_256G1_scaffold_239_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11694..12041)
DNA (348bp) protein (116aa)
UPI0003D692B2 related cluster n=1 Tax=unknown RepID=UPI0003D692B2
ArsC family protein {ECO:0000313|EMBL:ETI90893.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ArsC family protein
L3_060_256G1_scaffold_239_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12236..13237)
DNA (1002bp) protein (334aa)
Alpha/beta hydrolase fold n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M0W8_CLOB8
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABR36248.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_060_256G1_scaffold_239_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13444..14010)
DNA (567bp) protein (189aa)
Folate transporter FolT n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZ68_CLOSA
folT; folate transporter FolT
Folate transporter FolT {ECO:0000313|EMBL:AGX44822.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_060_256G1_scaffold_239_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14309..14602)
DNA (294bp) protein (98aa)
Putative stress protein (General stress protein 26) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5Q2_9CLOT
Putative stress protein (General stress protein 26) {ECO:0000313|EMBL:EKQ50174.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
L3_060_256G1_scaffold_239_16
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14571..14702)
DNA (132bp) protein (44aa)
Predicted transcriptional regulator n=2 Tax=Clostridium RepID=D8GQW7_CLOLD
transcriptional regulator, HxlR family
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AKA69013.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L3_060_256G1_scaffold_239_17
unknown

Not on your lists

comp(14867..14995)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_060_256G1_scaffold_239_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15075..16130)
DNA (1056bp) protein (352aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6Q4_9CLOT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EHJ01352.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
HD-GYP domain-containing protein
L3_060_256G1_scaffold_239_19
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16162..17244)
DNA (1083bp) protein (361aa)
HD-GYP domain-containing protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAF0_9CLOT
HD-GYP domain-containing protein {ECO:0000313|EMBL:EKQ55194.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
metal dependent phosphohydrolase
L3_060_256G1_scaffold_239_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17345..18223)
DNA (879bp) protein (293aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0ALL3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33649.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_060_256G1_scaffold_239_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18420..18578)
DNA (159bp) protein (53aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QZN5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54964.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_060_256G1_scaffold_239_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18675..19115)
DNA (441bp) protein (147aa)
ArsC family transcriptional regulator n=1 Tax=Clostridium beijerinckii RepID=UPI0002D4B09A
Arsenate reductase and related {ECO:0000313|EMBL:AJH01180.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
arsenate reductase-like protein
L3_060_256G1_scaffold_239_23
unknown

Not on your lists

comp(19134..19418)
DNA (285bp) protein (95aa)

This feature has no annotations

L3_060_256G1_scaffold_239_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19752..21602
DNA (1851bp) protein (617aa)
Cell wall-binding protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0E6_CLOPA
Cell wall binding repeat family protein {ECO:0000313|EMBL:AIY81114.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
cell wall binding repeat-containing protein
L3_060_256G1_scaffold_239_25
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21905..22156)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3DM82_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KHS56222.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
conserved hypothetical protein
L3_060_256G1_scaffold_239_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22273..23007)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LYW2_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR35542.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_060_256G1_scaffold_239_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23832..24140)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UR08_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES48390.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L3_060_256G1_scaffold_239_28
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24216..25388)
DNA (1173bp) protein (391aa)
Amidohydrolase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKG7_CELLD
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ADZ82127.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_060_256G1_scaffold_239_29
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25527..26384)
DNA (858bp) protein (286aa)
Lipoprotein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKG6_CELLD
NLPA lipoprotein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_060_256G1_scaffold_239_30
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26404..27075)
DNA (672bp) protein (224aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKG5_CELLD
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADZ82125.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Displaying items 1-30 of 85 in total

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