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L3_060_256G1_scaffold_266

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_266_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2..253
DNA (252bp) protein (84aa)
Preprotein translocase, SecY subunit domain protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AQK5_BIFLN
Protein translocase subunit secY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_060_256G1_scaffold_266_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

246..482
DNA (237bp) protein (79aa)
Transcriptional regulator WhiB n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3B0E3_BIFLN
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Transcription factor WhiB.
L3_060_256G1_scaffold_266_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

479..790
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B0F9_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32706.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_060_256G1_scaffold_266_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

790..981
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B0B8_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32722.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_060_256G1_scaffold_266_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1091..2542)
DNA (1452bp) protein (484aa)
Putative transposase DNA-binding domain protein n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NW83_9BIFI
putative transposase
Putative transposase DNA-binding domain protein {ECO:0000313|EMBL:CEF00247.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_060_256G1_scaffold_266_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2675..3946)
DNA (1272bp) protein (424aa)
FemAB family protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AQK3_BIFLN
FemAB family protein {ECO:0000313|EMBL:EIJ32711.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L3_060_256G1_scaffold_266_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3943..4374)
DNA (432bp) protein (144aa)
ASCH domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B0G2_BIFLN
ASCH domain protein {ECO:0000313|EMBL:EIJ32705.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
F-type H+-transporting ATPase alpha chain
L3_060_256G1_scaffold_266_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4367..4639)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AQL6_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32712.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L3_060_256G1_scaffold_266_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4620..4862)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3DKG6_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KHD95256.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L3_060_256G1_scaffold_266_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4859..5413)
DNA (555bp) protein (185aa)
5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AQL2_BIFLN
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000313|EMBL:KHD95257.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L3_060_256G1_scaffold_266_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5419..5655)
DNA (237bp) protein (79aa)
DivIVA domain protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AQL1_BIFLN
Cell division protein DivIVA {ECO:0000313|EMBL:KHD95258.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L3_060_256G1_scaffold_266_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5652..6689)
DNA (1038bp) protein (346aa)
Putative RNA ligase n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AQK8_BIFLN
2'-5' RNA ligase {ECO:0000313|EMBL:KHD95259.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L3_060_256G1_scaffold_266_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6686..6895)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AQK2_BIFLN
Putative RNA ligase {ECO:0000313|EMBL:EIJ32703.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_060_256G1_scaffold_266_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6913..7290)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AQL3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32708.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_060_256G1_scaffold_266_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7295..7675)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B0B3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32718.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_060_256G1_scaffold_266_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7896..8612)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3AQL4_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32709.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Integral membrane protein
L3_060_256G1_scaffold_266_17
unknown

Not on your lists

9015..9659
DNA (645bp) protein (215aa)

This feature has no annotations

L3_060_256G1_scaffold_266_18
unknown

Not on your lists

10613..10741
DNA (129bp) protein (43aa)

This feature has no annotations

L3_060_256G1_scaffold_266_19
unknown

Not on your lists

12847..13383
DNA (537bp) protein (179aa)

This feature has no annotations

L3_060_256G1_scaffold_266_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15329..16309
DNA (981bp) protein (327aa)
Plasmid encoded RepA protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B386_BIFLN
Plasmid encoded RepA protein {ECO:0000313|EMBL:EIJ32723.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
plasmid encoded RepA protein
L3_060_256G1_scaffold_266_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17151..19730)
DNA (2580bp) protein (860aa)
DNA (Cytosine-5-)-methyltransferase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B377_BIFLN
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EIJ32713.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
putative DNA methyltransferase
L3_060_256G1_scaffold_266_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19727..19909)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3B1I2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32714.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L3_060_256G1_scaffold_266_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20033..20275)
DNA (243bp) protein (81aa)
Preprotein translocase, SecG subunit n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3B1J9_BIFLN
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EIJ32699.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
preprotein translocase subunit SecG
L3_060_256G1_scaffold_266_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20457..20678)
DNA (222bp) protein (74aa)
Protein translocase subunit SecE n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3B1I6_BIFLN
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
secE; preprotein translocase subunit SecE
L3_060_256G1_scaffold_266_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20671..20904)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B379_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32719.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_060_256G1_scaffold_266_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20929..21753)
DNA (825bp) protein (275aa)
DivIVA domain protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3B1H2_BIFLN
DivIVA domain protein {ECO:0000313|EMBL:EIJ32704.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
cellulose-binding protein
L3_060_256G1_scaffold_266_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21855..23390)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B387_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32716.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_060_256G1_scaffold_266_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23390..23737)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3B1J7_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:AIW55186.1}; TaxID=1685 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve.;"
L3_060_256G1_scaffold_266_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23734..24615)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3B1H8_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32717.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L3_060_256G1_scaffold_266_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24898..25827)
DNA (930bp) protein (310aa)
PD-(D/E)XK nuclease family protein n=1 Tax=Bifidobacterium longum subsp. longum 2-2B RepID=I3B1K1_BIFLN
PD-(D/E)XK nuclease family protein {ECO:0000313|EMBL:EIJ32682.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
Displaying items 1-30 of 78 in total

View Taxonomy