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L3_060_256G1_scaffold_281

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Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_281_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(254..2884)
DNA (2631bp) protein (877aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=86 Tax=Escherichia coli RepID=B7N6S7_ECOLU
L3_060_256G1_scaffold_281_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2865..3377)
DNA (513bp) protein (171aa)
Regulatory protein RecX n=2 Tax=Escherichia coli RepID=H1FEX7_ECOLX
recX; regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_060_256G1_scaffold_281_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3446..4507)
DNA (1062bp) protein (354aa)
Protein RecA n=1481 Tax=Proteobacteria RepID=RECA_ECO24
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L3_060_256G1_scaffold_281_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4587..5084)
DNA (498bp) protein (166aa)
Nicotinamide-nucleotide amidohydrolase PncC n=874 Tax=Enterobacteriaceae RepID=PNCC_ECOL6
competence/damage-inducible protein CinA
Protein YgaD {ECO:0000313|EMBL:EGI49133.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_060_256G1_scaffold_281_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5229..6419)
DNA (1191bp) protein (397aa)
Membrane-bound lytic murein transglycosylase B n=82 Tax=Escherichia coli RepID=H1BUL3_ECOLX
Membrane-bound lytic murein transglycosylase B {ECO:0000313|EMBL:EHP66727.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
mltB; Membrane-bound lytic murein transglycosylase B,Membrane-bound lytic murein transglycosylase B precursor,murein hydrolase B,lytic murein transglycosylase B
L3_060_256G1_scaffold_281_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6570..7133
DNA (564bp) protein (188aa)
Glucitol/sorbitol permease IIC component n=742 Tax=Enterobacteriaceae RepID=PTHC_ECOLI
srlA; Glucitol/sorbitol permease IIC component
Glucitol/sorbitol permease IIC component {ECO:0000313|EMBL:KEO22752.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
L3_060_256G1_scaffold_281_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7130..8089
DNA (960bp) protein (320aa)
srlE; PTS system glucitol/sorbitol-specific transporter subunit IIB (EC:2.7.1.69)
PTS system glucitol/sorbitol-specific, EIIB component {ECO:0000313|EMBL:EFJ96952.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFJ96952.1};; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components n=193 Tax=Enterobacteriaceae RepID=J7Q984_ECOLX
L3_060_256G1_scaffold_281_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8100..8471
DNA (372bp) protein (124aa)
srlB; PTS system glucitol/sorbitol-specific transporter subunit IIA (EC:2.7.1.69)
PTS system, glucitol/sorbitol-specific IIA component n=169 Tax=Escherichia RepID=A1AEP4_ECOK1
PTS system, glucitol/sorbitol-specific, IIA component {ECO:0000313|EMBL:ESA88014.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_060_256G1_scaffold_281_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8475..9254
DNA (780bp) protein (260aa)
srlD; sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase) (EC:1.1.1.140)
Sorbitol-6-phosphate 2-dehydrogenase n=249 Tax=Enterobacteriaceae RepID=A1AEP5_ECOK1
Sorbitol-6-phosphate 2-dehydrogenase {ECO:0000313|EMBL:ETJ23748.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
L3_060_256G1_scaffold_281_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9360..9719
DNA (360bp) protein (120aa)
DNA-binding transcriptional activator of glucitol operon n=72 Tax=Escherichia coli RepID=B7N6T6_ECOLU
gutM; DNA-binding transcriptional activator GutM
Glucitol operon activator protein GutM {ECO:0000313|EMBL:ESA88016.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_060_256G1_scaffold_281_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9786..10559
DNA (774bp) protein (258aa)
DNA-bindng transcriptional repressor n=137 Tax=Escherichia coli RepID=B7N6T7_ECOLU
srlR; DNA-binding transcriptional repressor SrlR
DeoR C terminal sensor domain protein {ECO:0000313|EMBL:KEL71744.1}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
L3_060_256G1_scaffold_281_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10552..11517
DNA (966bp) protein (322aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
Arabinose 5-phosphate isomerase n=6 Tax=Enterobacteriaceae RepID=I0VG62_SHIFL
srlQ; D-arabinose 5-phosphate isomerase
L3_060_256G1_scaffold_281_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11514..13028)
DNA (1515bp) protein (505aa)
Anaerobic nitric oxide reductase transcription regulator NorR n=71 Tax=Escherichia coli RepID=NORR_ECOLU
norR; anaerobic nitric oxide reductase transcription regulator
Anaerobic nitric oxide reductase transcription regulator NorR {ECO:0000256|HAMAP-Rule:MF_01314, ECO:0000256|SAAS:SAAS00009293}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_060_256G1_scaffold_281_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13215..14654
DNA (1440bp) protein (480aa)
Anaerobic nitric oxide reductase flavorubredoxin n=70 Tax=Escherichia coli RepID=B7N6U0_ECOLU
norV; anaerobic nitric oxide reductase flavorubredoxin
Anaerobic nitric oxide reductase flavorubredoxin {ECO:0000256|HAMAP-Rule:MF_01312}; Short=FlRd {ECO:0000256|HAMAP-Rule:MF_01312};; Short=FlavoRb {ECO:0000256|HAMAP-Rule:MF_01312};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_060_256G1_scaffold_281_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14651..15784
DNA (1134bp) protein (378aa)
Nitric oxide reductase FlRd-NAD(+) reductase {ECO:0000256|HAMAP-Rule:MF_01313, ECO:0000256|SAAS:SAAS00194831}; EC=1.18.1.- {ECO:0000256|HAMAP-Rule:MF_01313, ECO:0000256|SAAS:SAAS00194837};; Flavorubredoxin reductase {ECO:0000256|HAMAP-Rule:MF_01313}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Nitric oxide reductase FlRd-NAD(+) reductase n=71 Tax=Escherichia coli RepID=NORW_ECOLU
norW; nitric oxide reductase
L3_060_256G1_scaffold_281_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15862..18102)
DNA (2241bp) protein (747aa)
Carbamoyltransferase hypF n=10 Tax=Escherichia coli RepID=L3HCA2_ECOLX
hypF; carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases
Carbamoyltransferase HypF {ECO:0000313|EMBL:ESA88022.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_060_256G1_scaffold_281_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18255..18782)
DNA (528bp) protein (176aa)
Electron transport protein HydN n=1315 Tax=Enterobacteriaceae RepID=HYDN_ECO57
hydN; electron transporter hydN
Electron transport protein hydN {ECO:0000313|EMBL:KEJ45275.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L3_060_256G1_scaffold_281_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18931..19944)
DNA (1014bp) protein (338aa)
Transcriptional regulator n=1 Tax=Escherichia coli 576-1 RepID=I4TZW3_ECOLX
ascG; DNA-binding transcriptional repressor
HTH-type transcriptional regulator AscG {ECO:0000313|EMBL:ESA88025.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_060_256G1_scaffold_281_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20201..21658
DNA (1458bp) protein (486aa)
ascF; PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC (EC:2.7.1.69)
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EFJ72333.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFJ72333.1};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
Fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component IIC component n=83 Tax=Escherichia coli RepID=B7N6U5_ECOLU
L3_060_256G1_scaffold_281_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21667..23091
DNA (1425bp) protein (475aa)
ascB; cryptic 6-phospho-beta-glucosidase (EC:3.2.1.86)
Cryptic 6-phospho-beta-glucosidase n=76 Tax=Escherichia coli RepID=B7N6U6_ECOLU
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EFJ72334.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_060_256G1_scaffold_281_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23249..23719)
DNA (471bp) protein (157aa)
hycI; hydrogenase 3 maturation protease (EC:3.4.-.-)
Hydrogenase maturation peptidase HycI {ECO:0000313|EMBL:EHX28701.1}; EC=3.4.23.- {ECO:0000313|EMBL:EHX28701.1};; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
Hydrogenase 3 maturation protease n=806 Tax=Enterobacteriaceae RepID=HYCI_ECO57
L3_060_256G1_scaffold_281_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23712..24122)
DNA (411bp) protein (137aa)
Protein required for maturation of hydrogenase 3 n=86 Tax=Escherichia coli RepID=B7N6U8_ECOLU
hycH; protein required for maturation of hydrogenase 3
Formate hydrogenlyase maturation protein hycH {ECO:0000313|EMBL:EQX85999.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L3_060_256G1_scaffold_281_23
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24119..24886)
DNA (768bp) protein (256aa)
Formate hydrogenlyase subunit 7 n=738 Tax=Enterobacteriaceae RepID=E2QQG8_ECOLX
hycG; formate hydrogenlyase subunit G
Formate hydrogenlyase subunit 7 {ECO:0000313|EMBL:EOU48875.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L3_060_256G1_scaffold_281_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24886..25428)
DNA (543bp) protein (181aa)
Formate hydrogenlyase complex iron-sulfur protein n=86 Tax=Escherichia coli RepID=B7N6V0_ECOLU
hycF; formate hydrogenlyase subunit 6
4Fe-4S binding domain protein {ECO:0000313|EMBL:ESA88031.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_060_256G1_scaffold_281_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25438..27147)
DNA (1710bp) protein (570aa)
hycE; hydrogenase 3, large subunit (EC:1.12.7.2)
Respiratory-chain NADH dehydrogenase, subunit n=1 Tax=Escherichia coli 907715 RepID=V0U095_ECOLX
Respiratory-chain NADH dehydrogenase, 30 Kd subunit {ECO:0000313|EMBL:EFJ72339.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_060_256G1_scaffold_281_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27165..28088)
DNA (924bp) protein (308aa)
Formate hydrogenlyase subunit 4 n=409 Tax=Enterobacteriaceae RepID=E2QQH1_ECOLX
hycD; formate hydrogenlyase subunit 4
Formate hydrogenlyase subunit 4 {ECO:0000313|EMBL:EZJ37752.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_060_256G1_scaffold_281_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28091..29917)
DNA (1827bp) protein (609aa)
Hydrogenase 3, membrane subunit n=74 Tax=Escherichia coli RepID=B7N6V3_ECOLU
Hydrogenase 3, membrane subunit {ECO:0000313|EMBL:CAR14214.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
hycC; formate hydrogenlyase subunit 3
L3_060_256G1_scaffold_281_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29914..30525)
DNA (612bp) protein (204aa)
Formate hydrogenlyase subunit 2 n=640 Tax=Enterobacteriaceae RepID=HYCB_ECOL6
Formate hydrogenlyase subunit 2
4Fe-4S binding domain protein {ECO:0000313|EMBL:EHW13900.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L3_060_256G1_scaffold_281_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30650..31111)
DNA (462bp) protein (154aa)
Formate hydrogenlyase regulatory protein HycA n=1044 Tax=Enterobacteriaceae RepID=HYCA_ECO57
formate hydrogenlyase regulatory protein HycA
Formate hydrogenlyase regulatory protein hycA {ECO:0000313|EMBL:EMU68546.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
L3_060_256G1_scaffold_281_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31323..31673
DNA (351bp) protein (117aa)
[NiFe] hydrogenase nickel incorporation protein HypA n=163 Tax=Enterobacteriaceae RepID=V6DZF5_ECOLX
hypA; hydrogenase nickel incorporation protein HypA
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
Displaying items 1-30 of 88 in total

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