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L3_060_256G1_scaffold_337

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_337_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(188..451)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXK0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98749.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(560..916)
DNA (357bp) protein (119aa)
SpoVA protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXK1_9FIRM
SpoVA protein.
SpoVA protein {ECO:0000313|EMBL:CBK98750.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_3
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(913..1938)
DNA (1026bp) protein (342aa)
Stage V sporulation protein AD n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q3V2_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CDC30420.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Stage V sporulation protein AD (SpoVAD).
L3_060_256G1_scaffold_337_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2052..2489)
DNA (438bp) protein (146aa)
Stage V sporulation protein AC n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXK2_9FIRM
stage V sporulation protein AC
Stage V sporulation protein AC {ECO:0000313|EMBL:CBK98751.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2567..3457
DNA (891bp) protein (297aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBK98752.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBK98752.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXK3_9FIRM
L3_060_256G1_scaffold_337_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3602..4189
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXK4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98753.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_7
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4268..5686
DNA (1419bp) protein (473aa)
MBOAT family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QII7_9FIRM
MBOAT family protein {ECO:0000313|EMBL:CDC30726.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
alginate biosynthesis protein AlgI
L3_060_256G1_scaffold_337_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5702..6874
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXK5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98754.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7075..7407
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXK6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98755.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7500..7826
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXK7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98756.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7965..9155)
DNA (1191bp) protein (397aa)
Chaperone protein DnaJ n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXK8_9FIRM
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9419..11251)
DNA (1833bp) protein (611aa)
Chaperone protein DnaK n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXK9_9FIRM
chaperone protein DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332, ECO:0000313|EMBL:CBK98758.1}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11344..11970)
DNA (627bp) protein (209aa)
Protein GrpE n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXL0_9FIRM
Molecular chaperone GrpE (heat shock protein)
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11967..13040)
DNA (1074bp) protein (358aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXL1_9FIRM
heat shock gene repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13230..13799)
DNA (570bp) protein (190aa)
Transcriptional regulator, AbrB family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXL2_9FIRM
transcriptional regulator, AbrB family
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:CBK98761.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13922..15196
DNA (1275bp) protein (425aa)
Predicted flavoproteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXL3_9FIRM
Predicted flavoproteins
Predicted flavoproteins {ECO:0000313|EMBL:CBK98762.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15288..16472)
DNA (1185bp) protein (395aa)
Tat pathway signal sequence domain protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02023.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_337_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16763..18262)
DNA (1500bp) protein (500aa)
Amino acid carrier protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXL4_9FIRM
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:CBK98763.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18653..18949)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXL5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98764.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_20
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19031..19936
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q1Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30738.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L3_060_256G1_scaffold_337_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19843..21276)
DNA (1434bp) protein (478aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXL7_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBK98766.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21441..22115
DNA (675bp) protein (225aa)
Predicted membrane protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXL8_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK98767.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22189..23028)
DNA (840bp) protein (280aa)
predicted 23S rRNA m(1)G methyltransferase (EC:2.1.1.51)
Predicted 23S rRNA m(1)G methyltransferase {ECO:0000313|EMBL:CBK98770.1}; EC=2.1.1.51 {ECO:0000313|EMBL:CBK98770.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Predicted 23S rRNA m(1)G methyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXM1_9FIRM
L3_060_256G1_scaffold_337_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23028..24974)
DNA (1947bp) protein (649aa)
Superfamily II DNA and RNA helicases (EC:3.6.1.-)
Superfamily II DNA and RNA helicases {ECO:0000313|EMBL:CBK98771.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK98771.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Superfamily II DNA and RNA helicases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXM2_9FIRM
L3_060_256G1_scaffold_337_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24987..26279)
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXM3_9FIRM
Protein of unknown function (DUF1015).
Uncharacterized protein {ECO:0000313|EMBL:CBK98772.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26329..27438)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXM4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98773.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27463..28074)
DNA (612bp) protein (204aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXM5_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA {ECO:0000313|EMBL:CBK98774.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28067..28792)
DNA (726bp) protein (242aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXM6_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE {ECO:0000313|EMBL:CBK98775.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28789..29826)
DNA (1038bp) protein (346aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXM7_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD {ECO:0000313|EMBL:CBK98776.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_337_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29840..30490)
DNA (651bp) protein (217aa)
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBK98777.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXM8_9FIRM
Displaying items 1-30 of 95 in total

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