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L3_060_256G1_scaffold_356

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_356_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(217..468)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95862.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_060_256G1_scaffold_356_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(831..1184)
DNA (354bp) protein (118aa)
Hpt domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K221_9FIRM
Hpt domain.
Hpt domain {ECO:0000313|EMBL:CBL00320.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1667..3037
DNA (1371bp) protein (457aa)
Permeases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K220_9FIRM
Permeases
Permeases {ECO:0000313|EMBL:CBL00319.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3135..3449)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K219_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00318.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3770..4768)
DNA (999bp) protein (333aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4C4_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEU97246.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
inner-membrane translocator
L3_060_256G1_scaffold_356_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4787..6328)
DNA (1542bp) protein (514aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL00316.1}; EC=3.6.3.17 {ECO:0000313|EMBL:CBL00316.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K217_9FIRM
L3_060_256G1_scaffold_356_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6497..7345)
DNA (849bp) protein (283aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K216_9FIRM
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL00315.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7380..8078
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05954.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_060_256G1_scaffold_356_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8051..9973
DNA (1923bp) protein (641aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K215_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBL00314.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9976..10323
DNA (348bp) protein (116aa)
FOG: HPt domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K214_9FIRM
FOG: HPt domain
FOG: HPt domain {ECO:0000313|EMBL:CBL00313.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10779..11918)
DNA (1140bp) protein (380aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CBL00312.1}; EC=2.7.6.1 {ECO:0000313|EMBL:CBL00312.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K213_9FIRM
L3_060_256G1_scaffold_356_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12149..13303)
DNA (1155bp) protein (385aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
S-adenosylmethionine synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K212_9FIRM
L3_060_256G1_scaffold_356_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13610..14275)
DNA (666bp) protein (222aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Deoxyribose-phosphate aldolase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K211_9FIRM
L3_060_256G1_scaffold_356_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14318..14455)
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K210_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00309.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14726..15343)
DNA (618bp) protein (206aa)
GtrA-like protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K209_9FIRM
GtrA-like protein.
GtrA-like protein {ECO:0000313|EMBL:CBL00308.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15563..17473)
DNA (1911bp) protein (637aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLN3_9FIRM
L3_060_256G1_scaffold_356_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17536..18144)
DNA (609bp) protein (203aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CBL00305.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CBL00305.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K206_9FIRM
L3_060_256G1_scaffold_356_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18141..18806)
DNA (666bp) protein (222aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000313|EMBL:CBL00304.1}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Cytidylate kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K205_9FIRM
L3_060_256G1_scaffold_356_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18865..20151)
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K204_9FIRM
conserved hypothetical protein TIGR00275
Uncharacterized protein {ECO:0000313|EMBL:CBL00303.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20280..21065)
DNA (786bp) protein (262aa)
Membrane proteins related to metalloendopeptidases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K203_9FIRM
Membrane proteins related to metalloendopeptidases
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:CBL00302.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21211..21447)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K202_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00301.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21447..22154)
DNA (708bp) protein (236aa)
Integral membrane protein, interacts with FtsH n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K201_9FIRM
Integral membrane protein, interacts with FtsH
Integral membrane protein, interacts with FtsH {ECO:0000313|EMBL:CBL00300.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22265..23347
DNA (1083bp) protein (361aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CBL00299.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CBL00299.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K200_9FIRM
L3_060_256G1_scaffold_356_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23351..24040)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00298.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24059..24658)
DNA (600bp) protein (200aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z8_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:CBL00297.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24655..25428)
DNA (774bp) protein (258aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z7_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:CBL00296.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25595..26869
DNA (1275bp) protein (425aa)
Branched-chain amino acid uptake carrier n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z6_9FIRM
branched-chain amino acid uptake carrier
Branched-chain amino acid uptake carrier {ECO:0000313|EMBL:CBL00295.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26917..27936)
DNA (1020bp) protein (340aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z5_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components {ECO:0000313|EMBL:CBL00294.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28105..28785
DNA (681bp) protein (227aa)
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z4_9FIRM
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases {ECO:0000313|EMBL:CBL00293.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_356_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28832..29812
DNA (981bp) protein (327aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1Z3_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL00292.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 55 in total

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