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L3_060_256G1_scaffold_379

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Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_379_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(391..939)
DNA (549bp) protein (183aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:5.4.3.8)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000256|HAMAP-Rule:MF_01437}; EC=2.7.8.5 {ECO:0000256|HAMAP-Rule:MF_01437};; Phosphatidylglycerophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01437}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1265 Tax=Enterobacteriaceae RepID=PGSA_ECO57
L3_060_256G1_scaffold_379_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(996..2828)
DNA (1833bp) protein (611aa)
UvrABC system protein C n=1043 Tax=Enterobacteriaceae RepID=UVRC_ECO24
UvrABC system protein C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_060_256G1_scaffold_379_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2825..3481)
DNA (657bp) protein (219aa)
Response regulator UvrY n=794 Tax=Enterobacteriaceae RepID=UVRY_ECO57
response regulator
DNA-binding response regulator UvrY in two-component regulatory system with BarA {ECO:0000313|EMBL:CAS09580.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L3_060_256G1_scaffold_379_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3940..4164
DNA (225bp) protein (75aa)
Uncharacterized protein YecF n=1180 Tax=Enterobacteriaceae RepID=YECF_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV98108.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L3_060_256G1_scaffold_379_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4232..4954)
DNA (723bp) protein (241aa)
Transcriptional regulator of ftsQAZ gene cluster n=182 Tax=Escherichia RepID=J7R5K1_ECOLX
sdiA; DNA-binding transcriptional activator SdiA
Regulatory protein SdiA {ECO:0000313|EMBL:ELG89021.1}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
L3_060_256G1_scaffold_379_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5184..5936)
DNA (753bp) protein (251aa)
Histidine/lysine/arginine/ornithine transporter subunit n=69 Tax=Escherichia coli RepID=D6IR33_ECOLX
yecC; putative amino-acid ABC transporter ATP-binding protein YecC
Putative transporter subunit: ATP-binding component of ABC superfamily transporter {ECO:0000313|EMBL:CAR13402.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_060_256G1_scaffold_379_7
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5933..6601)
DNA (669bp) protein (223aa)
Inner membrane amino-acid ABC transporter permease protein YecS n=1080 Tax=Enterobacteriaceae RepID=YECS_ECOL6
putative transporter subunit
Amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein {ECO:0000313|EMBL:EJZ66556.1}; TaxID=766155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1485-80.;"
L3_060_256G1_scaffold_379_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6616..7602)
DNA (987bp) protein (329aa)
D-cysteine desulfhydrase {ECO:0000256|HAMAP-Rule:MF_01045}; EC=4.4.1.15 {ECO:0000256|HAMAP-Rule:MF_01045};; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
yedO; D-cysteine desulfhydrase (EC:4.4.1.15)
D-cysteine desulfhydrase n=10 Tax=Escherichia RepID=V0YR95_ECOLX
L3_060_256G1_scaffold_379_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7707..8564)
DNA (858bp) protein (286aa)
Cystine-binding periplasmic protein n=1 Tax=Escherichia coli UMEA 3240-1 RepID=T9H7Y6_ECOLX
cystine transporter subunit
Cystine-binding periplasmic protein {ECO:0000313|EMBL:EOV07770.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
L3_060_256G1_scaffold_379_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8595..9146)
DNA (552bp) protein (184aa)
Flagellar regulatory protein FliZ n=8 Tax=Escherichia RepID=V0Y231_ECOLX
Flagellar regulatory protein FliZ {ECO:0000313|EMBL:ESD75011.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
fliZ; RpoS antagonist, putative regulator of FliA activity
L3_060_256G1_scaffold_379_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9192..9911)
DNA (720bp) protein (240aa)
RNA polymerase sigma factor FliA n=959 Tax=Enterobacteriaceae RepID=FLIA_ECO57
RNA polymerase sigma factor for flagellar operon
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L3_060_256G1_scaffold_379_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10077..11570)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=5 Tax=Escherichia RepID=I2R2M0_9ESCH
fliC; flagellin
Flagellin {ECO:0000313|EMBL:BAI30971.1}; TaxID=585395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H2 (strain 12009 / EHEC).;"
L3_060_256G1_scaffold_379_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11825..13237
DNA (1413bp) protein (471aa)
Flagellar hook-associated protein 2 n=7 Tax=Escherichia RepID=I2R2M1_9ESCH
Flagellar hook-associated protein 2 {ECO:0000313|EMBL:ESA74634.1}; TaxID=1268979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907357.;"
fliD; flagellar capping protein
L3_060_256G1_scaffold_379_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13252..13662
DNA (411bp) protein (137aa)
Flagellar protein fliS n=7 Tax=Escherichia RepID=I2R2M2_9ESCH
fliS; flagellar protein FliS
Flagellar protein FliS {ECO:0000313|EMBL:EII19608.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L3_060_256G1_scaffold_379_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13662..14027
DNA (366bp) protein (122aa)
Flagellar protein FliT n=110 Tax=Escherichia RepID=FLIT_ECO7I
fliT; putative chaperone
Flagellar protein FliT {ECO:0000256|HAMAP-Rule:MF_01180, ECO:0000256|SAAS:SAAS00068921}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L3_060_256G1_scaffold_379_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14105..15592
DNA (1488bp) protein (496aa)
alpha-amylase (EC:3.2.1.1)
Cytoplasmic alpha-amylase {ECO:0000313|EMBL:EIH14695.1}; EC=3.2.1.1 {ECO:0000313|EMBL:EIH14695.1};; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
Cytoplasmic alpha-amylase n=569 Tax=Enterobacteriaceae RepID=J7QSC3_ECOLX
L3_060_256G1_scaffold_379_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15626..16039)
DNA (414bp) protein (138aa)
Uncharacterized protein n=865 Tax=Enterobacteriaceae RepID=C3T502_ECOLX
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EII19430.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L3_060_256G1_scaffold_379_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16226..17431
DNA (1206bp) protein (402aa)
Uncharacterized protein n=114 Tax=Escherichia RepID=B7L8U2_ECO55
inner membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KEN98453.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L3_060_256G1_scaffold_379_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17428..17661
DNA (234bp) protein (78aa)
UPF0033 protein YedF n=1782 Tax=Enterobacteriaceae RepID=YEDF_ECO57
yedF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG34916.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
L3_060_256G1_scaffold_379_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17770..18267
DNA (498bp) protein (166aa)
Uncharacterized protein n=69 Tax=Escherichia RepID=D7XPB2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KEN90426.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
yedK; hypothetical protein
L3_060_256G1_scaffold_379_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18149..18418)
DNA (270bp) protein (90aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=U9ZKC5_ECOLX
IS605 family transposase OrfB
Uncharacterized protein {ECO:0000313|EMBL:ESK36186.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L3_060_256G1_scaffold_379_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18477..19025
DNA (549bp) protein (183aa)
Transposase ORF A, IS609 family protein n=85 Tax=Escherichia RepID=K0AJH3_ECO1C
transposase ORF A, IS609 family protein
Transposase {ECO:0000313|EMBL:ELE00346.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L3_060_256G1_scaffold_379_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19182..19979)
DNA (798bp) protein (266aa)
DNA-binding transcriptional regulator n=135 Tax=Escherichia RepID=J9ZK60_ECO14
DNA-binding transcriptional regulator
Phage transcriptional regulator {ECO:0000313|EMBL:ETY48772.1}; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
L3_060_256G1_scaffold_379_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19989..20540)
DNA (552bp) protein (184aa)
Uncharacterized protein n=118 Tax=Escherichia RepID=D2NJK3_ECOS5
kinase inhibitor
Phage kinase inhibitor {ECO:0000313|EMBL:ELC40345.1}; TaxID=1169340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE21.;"
L3_060_256G1_scaffold_379_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20709..21041)
DNA (333bp) protein (111aa)
Multidrug efflux protein n=9 Tax=Enterobacteriaceae RepID=A1AC85_ECOK1
multidrug transporter EmrE
Multidrug transporter emrE {ECO:0000313|EMBL:KDY88867.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L3_060_256G1_scaffold_379_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21385..21699)
DNA (315bp) protein (105aa)
Flagellar hook-basal body complex protein FliE n=206 Tax=Escherichia RepID=FLIE_ECO55
fliE; flagellar hook-basal body complex protein FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 196-1.;"
L3_060_256G1_scaffold_379_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21914..23572
DNA (1659bp) protein (553aa)
Flagellar M-ring protein n=48 Tax=Escherichia RepID=D8C597_ECOLX
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
fliF; flagellar MS-ring protein
L3_060_256G1_scaffold_379_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23565..24560
DNA (996bp) protein (332aa)
Flagellar motor switch protein FliG n=1290 Tax=Enterobacteriaceae RepID=FLIG_ECO57
flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L3_060_256G1_scaffold_379_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24553..25239
DNA (687bp) protein (229aa)
Flagellar assembly protein FliH n=226 Tax=Escherichia RepID=B1IZW9_ECOLC
fliH; flagellar biosynthesis protein FliH
Flagellar assembly protein fliH {ECO:0000313|EMBL:ELC08558.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L3_060_256G1_scaffold_379_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25239..26612
DNA (1374bp) protein (458aa)
fliI; flagellum-specific ATP synthase (EC:3.6.3.14)
Flagellum-specific ATP synthase n=651 Tax=Enterobacteriaceae RepID=FLII_ECOLI
ATPase, FliI/YscN family {ECO:0000313|EMBL:ADX50450.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 55124 / KO11).;"
Displaying items 1-30 of 74 in total

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