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L3_060_256G1_scaffold_385

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Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_385_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(221..2464)
DNA (2244bp) protein (748aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
DNA gyrase/topoisomerase IV, A subunit n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8A0_RUMGN
L3_060_256G1_scaffold_385_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2494..4416)
DNA (1923bp) protein (641aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase, B subunit, C-terminal domain protein n=4 Tax=Clostridiales RepID=A7B899_RUMGN
DNA gyrase, B subunit {ECO:0000313|EMBL:ETD16715.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_060_256G1_scaffold_385_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4514..5743)
DNA (1230bp) protein (410aa)
Stage II sporulation protein P n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B898_RUMGN
Stage II sporulation protein P {ECO:0000313|EMBL:EDN75831.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Stage II sporulation protein P (SpoIIP).
L3_060_256G1_scaffold_385_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5753..6730)
DNA (978bp) protein (326aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
GPR endopeptidase (EC:3.4.24.78)
Germination protease n=4 Tax=Clostridiales RepID=A7B897_RUMGN
L3_060_256G1_scaffold_385_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6920..7183
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=3 Tax=Clostridiales RepID=F7JUL9_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
SSU ribosomal protein S20P
L3_060_256G1_scaffold_385_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7273..7914)
DNA (642bp) protein (214aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U8W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49347.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_385_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8011..8859)
DNA (849bp) protein (283aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5UFI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67582.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
bglG2; cryptic beta-glucoside bgl operon antiterminator
L3_060_256G1_scaffold_385_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8999..11197)
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67583.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L3_060_256G1_scaffold_385_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11446..12813)
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWA2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ67584.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_060_256G1_scaffold_385_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12934..13953)
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=4 Tax=Clostridiales RepID=A7B367_RUMGN
L3_060_256G1_scaffold_385_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14039..14539)
DNA (501bp) protein (167aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=3 Tax=Lachnospiraceae RepID=A7B366_RUMGN
Acetolactate synthase {ECO:0000313|EMBL:EGN49352.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_060_256G1_scaffold_385_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14662..14994)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5UFI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49353.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_385_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15020..15625)
DNA (606bp) protein (202aa)
Metallo-beta-lactamase domain protein n=3 Tax=Lachnospiraceae RepID=A7B364_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49354.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Zn-dependent hydrolases, including glyoxylases
L3_060_256G1_scaffold_385_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15831..16394
DNA (564bp) protein (188aa)
Acetyltransferase, GNAT family n=4 Tax=Clostridiales RepID=A7B363_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49355.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
N-acetyltransferase GCN5
L3_060_256G1_scaffold_385_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16448..17464)
DNA (1017bp) protein (339aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=2 Tax=Clostridiales RepID=A7B362_RUMGN
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCZ67590.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_060_256G1_scaffold_385_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17504..18424)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNM4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16729.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
dTDP-glucose pyrophosphorylase
L3_060_256G1_scaffold_385_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18599..20407)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPI0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16730.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_060_256G1_scaffold_385_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20496..22496)
DNA (2001bp) protein (667aa)
Osmosensitive K+ channel histidine kinase KdpD (EC:2.7.3.-)
Universal stress family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B358_RUMGN
Universal stress family protein {ECO:0000313|EMBL:EDN77677.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_060_256G1_scaffold_385_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22506..23159)
DNA (654bp) protein (218aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=3 Tax=Lachnospiraceae RepID=A7B357_RUMGN
L3_060_256G1_scaffold_385_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23173..25227)
DNA (2055bp) protein (685aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Potassium-transporting ATPase B chain n=2 Tax=Lachnospiraceae RepID=F7JUN4_9FIRM
potassium-transporting ATPase subunit B
L3_060_256G1_scaffold_385_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25254..26984)
DNA (1731bp) protein (577aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Potassium-transporting ATPase A chain n=2 Tax=Lachnospiraceae RepID=F7JUN5_9FIRM
kdpA; potassium-transporting ATPase subunit A
L3_060_256G1_scaffold_385_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27418..27732
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A7B352_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49364.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_385_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27949..28662
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQG7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16736.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
short-chain dehydrogenase/reductase SDR
L3_060_256G1_scaffold_385_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28773..29480)
DNA (708bp) protein (236aa)
4Fe-4S binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B350_RUMGN
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDN77669.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_060_256G1_scaffold_385_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29567..30220
DNA (654bp) protein (218aa)
Cyclic nucleotide-binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B349_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49368.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_385_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30318..30536)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNN3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16739.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_060_256G1_scaffold_385_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30569..30949)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPJ1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49370.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_385_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30991..31152)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQH2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16741.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_060_256G1_scaffold_385_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31322..32014
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67605.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
peptidase S51 dipeptidase E
L3_060_256G1_scaffold_385_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32088..32792)
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=3 Tax=Lachnospiraceae RepID=A7B347_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49373.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Displaying items 1-30 of 87 in total

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