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L3_060_256G1_scaffold_486

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_486_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(148..831)
DNA (684bp) protein (228aa)
Predicted glutamine amidotransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZQ1_9FIRM
Predicted glutamine amidotransferases
Predicted glutamine amidotransferases {ECO:0000313|EMBL:CBK99500.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1111..1242
DNA (132bp) protein (44aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZQ0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99499.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1474..2190
DNA (717bp) protein (239aa)
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP9_9FIRM
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases {ECO:0000313|EMBL:CBK99498.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_4
Selenomonas infelix, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2249..3157)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Selenomonas infelix ATCC 43532 RepID=G5GM07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHG22252.1}; TaxID=679201 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas infelix ATCC 43532.;"
Restriction endonuclease
L3_060_256G1_scaffold_486_5
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3193..4143)
DNA (951bp) protein (317aa)
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PY01_9FIRM
Pseudouridine synthase {ECO:0000313|EMBL:CDC29313.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L3_060_256G1_scaffold_486_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4364..5101
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99496.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5523..8126
DNA (2604bp) protein (868aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP6_9FIRM
L3_060_256G1_scaffold_486_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8392..8724
DNA (333bp) protein (111aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP5_9FIRM
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases {ECO:0000313|EMBL:CBK99494.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8754..9293
DNA (540bp) protein (180aa)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins (EC:2.4.2.7)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins {ECO:0000313|EMBL:CBK99493.1}; EC=2.4.2.7 {ECO:0000313|EMBL:CBK99493.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP4_9FIRM
L3_060_256G1_scaffold_486_10
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9300..11441
DNA (2142bp) protein (714aa)
ComEC/Rec2-like protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q8G9_9FIRM
ComEC/Rec2-like protein {ECO:0000313|EMBL:CDC29319.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ComEC/Rec2-related protein
L3_060_256G1_scaffold_486_11
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11479..12507
DNA (1029bp) protein (343aa)
DNA polymerase III delta subunit n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q0I9_9FIRM
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDC29320.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
DNA polymerase III, delta subunit
L3_060_256G1_scaffold_486_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12504..13121
DNA (618bp) protein (206aa)
Small primase-like proteins (Toprim domain) (EC:3.1.26.8)
Small primase-like proteins (Toprim domain) {ECO:0000313|EMBL:CBK99492.1}; EC=3.1.26.8 {ECO:0000313|EMBL:CBK99492.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Small primase-like proteins (Toprim domain) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP3_9FIRM
L3_060_256G1_scaffold_486_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13279..14649
DNA (1371bp) protein (457aa)
Transporter n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP2_9FIRM
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14704..15108)
DNA (405bp) protein (135aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP1_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99490.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15105..15677)
DNA (573bp) protein (191aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP0_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99489.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15899..17449
DNA (1551bp) protein (517aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN9_9FIRM
L3_060_256G1_scaffold_486_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17607..17873)
DNA (267bp) protein (89aa)
Helix-turn-helix n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6F9_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL03168.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_486_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17967..19481
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NMC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC13348.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_060_256G1_scaffold_486_19
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19493..20242
DNA (750bp) protein (250aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
DNA modification methylase n=1 Tax=Clostridium sp. CAG:413 RepID=R6PU77_9CLOT
DNA modification methylase
L3_060_256G1_scaffold_486_20
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20401..21294
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z820_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51077.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_060_256G1_scaffold_486_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21634..22287
DNA (654bp) protein (218aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:CBK99487.1}; EC=3.2.2.21 {ECO:0000313|EMBL:CBK99487.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA-3-methyladenine glycosylase II n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN8_9FIRM
L3_060_256G1_scaffold_486_22
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22294..22806
DNA (513bp) protein (171aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
O-6-methylguanine DNA methyltransferase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q8V3_9FIRM
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CDC27211.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L3_060_256G1_scaffold_486_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22858..24252)
DNA (1395bp) protein (465aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.97.-.- 1.4.1.14 1.4.1.13)
Sulfide dehydrogenase (Flavoprotein) subunit SudA {ECO:0000313|EMBL:CBK99486.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBK99486.1};; EC=1.4.1.14 {ECO:0000313|EMBL:CBK99486.1};; EC=1.97.-.- {ECO:0000313|EMBL:CBK99486.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Sulfide dehydrogenase (Flavoprotein) subunit SudA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN7_9FIRM
L3_060_256G1_scaffold_486_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24254..25099)
DNA (846bp) protein (282aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Sulfide dehydrogenase (Flavoprotein) subunit SudB {ECO:0000313|EMBL:CBK99485.1}; EC=1.18.1.2 {ECO:0000313|EMBL:CBK99485.1};; EC=1.97.-.- {ECO:0000313|EMBL:CBK99485.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN6_9FIRM
L3_060_256G1_scaffold_486_25
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26332..28113
DNA (1782bp) protein (594aa)
yheI; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q2R4_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC30045.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L3_060_256G1_scaffold_486_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28110..29996
DNA (1887bp) protein (629aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN5_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK99484.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30045..30605)
DNA (561bp) protein (187aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Sortase and related acyltransferases {ECO:0000313|EMBL:CBK99483.1}; EC=2.3.1.- {ECO:0000313|EMBL:CBK99483.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Sortase and related acyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN4_9FIRM
L3_060_256G1_scaffold_486_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30618..31547)
DNA (930bp) protein (310aa)
Predicted permeases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN3_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBK99482.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31563..32558)
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99481.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_486_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32847..33224
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN1_9FIRM
Protein of unknown function (DUF1696).
Uncharacterized protein {ECO:0000313|EMBL:CBK99480.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 67 in total

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