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L3_060_256G1_scaffold_558

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_558_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1005
DNA (1005bp) protein (335aa)
SNF2 family N-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6T7_9FIRM
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:EDP22888.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
DNA methylase
L3_060_256G1_scaffold_558_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1002..1334
DNA (333bp) protein (111aa)
Bacterial mobilisation protein (MobC) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBA6_9FIRM
Bacterial mobilisation protein (MobC).
Bacterial mobilisation protein (MobC) {ECO:0000313|EMBL:CBL02119.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_558_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1463..1741
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6T9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22890.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_060_256G1_scaffold_558_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1807..3195
DNA (1389bp) protein (463aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ23_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EFQ06825.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Relaxase/Mobilisation nuclease domain.
L3_060_256G1_scaffold_558_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3382..4128)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJS5_9FIRM
Protein of unknown function.
Uncharacterized protein {ECO:0000313|EMBL:EFQ06559.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_060_256G1_scaffold_558_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4141..4707)
DNA (567bp) protein (189aa)
Uncharacterized protein n=3 Tax=Faecalibacterium prausnitzii RepID=C7H886_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01214.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_558_7
unknown

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comp(4800..4934)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_060_256G1_scaffold_558_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4989..5564)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06565.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Accessory gene regulator B.
L3_060_256G1_scaffold_558_9
unknown

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comp(5688..5867)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_060_256G1_scaffold_558_10
unknown

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comp(5898..6395)
DNA (498bp) protein (166aa)

This feature has no annotations

L3_060_256G1_scaffold_558_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6616..7314
DNA (699bp) protein (233aa)
Response regulator of the LytR/AlgR family n=3 Tax=Faecalibacterium prausnitzii RepID=D4K8P7_9FIRM
Response regulator of the LytR/AlgR family
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDP21523.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_060_256G1_scaffold_558_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7316..8578
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SC45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21524.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_060_256G1_scaffold_558_13

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9119..10375
DNA (1257bp) protein (419aa)
Transposase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAM7_9FIRM
Uncultured bacterium extrachromosomal DNA RGI01438 {ECO:0000313|EMBL:CDL66485.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
IS110, transposase
L3_060_256G1_scaffold_558_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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10824..10964
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ALG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC97362.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_060_256G1_scaffold_558_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11055..11291
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S998_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22183.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_060_256G1_scaffold_558_16
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11593..12915)
DNA (1323bp) protein (441aa)
Radical SAM domain protein n=2 Tax=Blautia RepID=A7B1H9_RUMGN
Radical SAM domain protein {ECO:0000313|EMBL:EEX20286.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
arylsulfatase
L3_060_256G1_scaffold_558_17
unknown

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comp(12920..13282)
DNA (363bp) protein (121aa)

This feature has no annotations

L3_060_256G1_scaffold_558_18
unknown

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comp(13376..13621)
DNA (246bp) protein (82aa)

This feature has no annotations

L3_060_256G1_scaffold_558_19
Mageeibacillus indolicus, Mageeibacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13769..15415)
DNA (1647bp) protein (549aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R026_CLOB3
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ADC91832.1}; TaxID=699246 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus.;" source="Mageeibacillus indolicus (strain UPII9-5) (Clostridiales genomosp.; BVAB3 (strain UPII9-5)).;"
L3_060_256G1_scaffold_558_20
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16155..16412)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAW7_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ86207.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
L3_060_256G1_scaffold_558_21
unknown

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comp(16437..17072)
DNA (636bp) protein (212aa)

This feature has no annotations

L3_060_256G1_scaffold_558_22
unknown

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comp(17425..17577)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_060_256G1_scaffold_558_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17593..18156)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95139.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
L3_060_256G1_scaffold_558_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18252..19574)
DNA (1323bp) protein (441aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9W7_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:CBL01630.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_558_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19562..20326)
DNA (765bp) protein (255aa)
Response regulator of the LytR/AlgR family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8L1_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBL01174.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_558_26
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20446..20802
DNA (357bp) protein (119aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUP6_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDO60696.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L3_060_256G1_scaffold_558_27
unknown

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21138..21896
DNA (759bp) protein (253aa)

This feature has no annotations

L3_060_256G1_scaffold_558_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22501..22692)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8K4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01167.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_558_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22896..24215
DNA (1320bp) protein (440aa)
DNA-binding transcriptional activator of the SARP family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZS0_9FIRM
DNA-binding transcriptional activator of the SARP family
DNA-binding transcriptional activator of the SARP family {ECO:0000313|EMBL:CBK99519.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_558_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24738..25202
DNA (465bp) protein (155aa)
Sigma-70, region 4 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K184_9FIRM
Sigma-70, region 4.
Sigma-70, region 4 {ECO:0000313|EMBL:CBL00033.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 43 in total

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