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L3_060_256G1_scaffold_615

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_615_1
unknown

Not on your lists

comp(26..646)
DNA (621bp) protein (207aa)

This feature has no annotations

L3_060_256G1_scaffold_615_2
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(639..2288)
DNA (1650bp) protein (550aa)
Recombinase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZY13_MAHA5
recombinase
Recombinase {ECO:0000313|EMBL:AEE97709.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_060_256G1_scaffold_615_3
unknown

Not on your lists

comp(2338..2655)
DNA (318bp) protein (106aa)

This feature has no annotations

L3_060_256G1_scaffold_615_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2680..3264)
DNA (585bp) protein (195aa)
DNA-binding helix-turn-helix protein n=7 Tax=Clostridium difficile RepID=G6BA67_CLODI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHJ28443.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
helix-turn-helix domain-containing protein
L3_060_256G1_scaffold_615_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3452..3694
DNA (243bp) protein (81aa)
DNA-binding helix-turn-helix protein n=7 Tax=Clostridium difficile RepID=G6BA68_CLODI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHJ28444.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
helix-turn-helix domain-containing protein
L3_060_256G1_scaffold_615_6
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3740..4234
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GQR3_CLOLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK16218.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
L3_060_256G1_scaffold_615_7
unknown

Not on your lists

4275..4445
DNA (171bp) protein (57aa)

This feature has no annotations

L3_060_256G1_scaffold_615_8
unknown

Not on your lists

4442..5035
DNA (594bp) protein (198aa)
lytic transglycosylase
L3_060_256G1_scaffold_615_9
unknown

Not on your lists

5041..5247
DNA (207bp) protein (69aa)

This feature has no annotations

L3_060_256G1_scaffold_615_10
unknown

Not on your lists

5260..5541
DNA (282bp) protein (94aa)

This feature has no annotations

L3_060_256G1_scaffold_615_11
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5501..6004
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:GAE89497.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
hypothetical protein
L3_060_256G1_scaffold_615_12
unknown

Not on your lists

5997..6332
DNA (336bp) protein (112aa)

This feature has no annotations

L3_060_256G1_scaffold_615_13
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6329..7330
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5F9P4_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH08547.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
L3_060_256G1_scaffold_615_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7327..11208
DNA (3882bp) protein (1294aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQC1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92968.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_060_256G1_scaffold_615_15

Not on your lists

11269..12117
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BVC7_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75772.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
hypothetical protein
L3_060_256G1_scaffold_615_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12077..13006
DNA (930bp) protein (310aa)
IstB-like ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5Y1_9FIRM
IstB-like ATP-binding protein {ECO:0000313|EMBL:EDS13138.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
IstB ATP binding domain-containing protein
L3_060_256G1_scaffold_615_17
unknown

Not on your lists

13006..13272
DNA (267bp) protein (89aa)

This feature has no annotations

L3_060_256G1_scaffold_615_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13269..13691
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34520.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_060_256G1_scaffold_615_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13663..15603
DNA (1941bp) protein (647aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037B76D1
Uncharacterized protein {ECO:0000313|EMBL:EHO28076.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
DNA methyltransferase
L3_060_256G1_scaffold_615_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15600..16535
DNA (936bp) protein (312aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
DNA methylase N-4/N-6 n=2 Tax=Pseudomonas aeruginosa (strain LESB58) RepID=B7V4M1_PSEA8
DNA methylase N-4/N-6
L3_060_256G1_scaffold_615_21
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16548..17339
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9ZS66_9CLOT
Phage gp37/gp68 putative {ECO:0000313|EMBL:CDF23330.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
phage gp37/gp68
L3_060_256G1_scaffold_615_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17336..17857
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72014.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_060_256G1_scaffold_615_23
unknown

Not on your lists

17854..18309
DNA (456bp) protein (152aa)

This feature has no annotations

L3_060_256G1_scaffold_615_24
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18296..18838
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9WQK1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96363.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_060_256G1_scaffold_615_25
unknown

Not on your lists

18835..19263
DNA (429bp) protein (143aa)

This feature has no annotations

L3_060_256G1_scaffold_615_26
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19260..19892
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J306_DESRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO49459.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
L3_060_256G1_scaffold_615_27
unknown

Not on your lists

19876..20235
DNA (360bp) protein (120aa)

This feature has no annotations

L3_060_256G1_scaffold_615_28
unknown

Not on your lists

20250..20492
DNA (243bp) protein (81aa)

This feature has no annotations

L3_060_256G1_scaffold_615_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20489..20995
DNA (507bp) protein (169aa)
Holliday junction resolvase RecU {ECO:0000256|SAAS:SAAS00056687}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00275393};; EC=3.1.22.- {ECO:0000256|SAAS:SAAS00056689};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Putative recombination protein U n=2 Tax=Oscillibacter RepID=U2QGV2_9FIRM
prophage LambdaCh01
L3_060_256G1_scaffold_615_30
unknown

Not on your lists

20979..21158
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

View Taxonomy