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L3_060_256G1_scaffold_918

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_918_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..354)
DNA (354bp) protein (118aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Ruminococcus torques L2-14 RepID=D4M217_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
TnpX site-specific recombinase family protein {ECO:0000313|EMBL:ERI78728.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_060_256G1_scaffold_918_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(378..1394)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCK4_9FIRM
Type IV secretory pathway, VirD4 components
Uncharacterized protein {ECO:0000313|EMBL:EDP21266.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_060_256G1_scaffold_918_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1391..1849)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZU8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99547.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1879..2325)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20666.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_060_256G1_scaffold_918_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2449..2895)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8J9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01162.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_918_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2905..3330)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8J8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01161.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_918_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3394..4320)
DNA (927bp) protein (309aa)
ParB-like partition proteins n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8J7_9FIRM
ParB-like partition proteins
ParB-like partition proteins {ECO:0000313|EMBL:CBL01160.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_918_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4277..5128)
DNA (852bp) protein (284aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZM61_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EFQ05756.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ATPases involved in chromosome partitioning
L3_060_256G1_scaffold_918_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5109..5987)
DNA (879bp) protein (293aa)
Replication initiator protein A (RepA) N-terminus n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZV3_9FIRM
Replication initiator protein A (RepA) N-terminus.
Replication initiator protein A (RepA) N-terminus {ECO:0000313|EMBL:CBK99552.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_10
unknown

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comp(5984..6163)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_060_256G1_scaffold_918_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6905..7222)
DNA (318bp) protein (106aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2T2_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBK97825.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7422..8429
DNA (1008bp) protein (336aa)
Phosphoglycerate dehydrogenase and related dehydrogenases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2T3_9FIRM
Phosphoglycerate dehydrogenase and related dehydrogenases
Phosphoglycerate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CBK97826.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8494..10524)
DNA (2031bp) protein (677aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBK97827.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
hypothetical protein
L3_060_256G1_scaffold_918_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10589..11929)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21550.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_060_256G1_scaffold_918_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11926..12651)
DNA (726bp) protein (242aa)
Response regulator of the LytR/AlgR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2T6_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK97829.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12874..14832)
DNA (1959bp) protein (653aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2T7_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBK97830.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15088..16275)
DNA (1188bp) protein (396aa)
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2T8_9FIRM
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family {ECO:0000313|EMBL:CBK97831.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18003..18686
DNA (684bp) protein (228aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2T9_9FIRM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18918..19142
DNA (225bp) protein (75aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase F0 subcomplex C subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2U0_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19160..19651
DNA (492bp) protein (164aa)
ATP synthase, F0 subunit b (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2U1_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19641..21395
DNA (1755bp) protein (585aa)
proton translocating ATP synthase, F1 alpha subunit (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346, ECO:0000313|EMBL:CBK97835.1};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ATP synthase subunit alpha n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2U2_9FIRM
L3_060_256G1_scaffold_918_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21382..22263
DNA (882bp) protein (294aa)
ATP synthase F1 subcomplex gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2U3_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22531..23943
DNA (1413bp) protein (471aa)
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347, ECO:0000313|EMBL:CBK97837.1};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ATP synthase subunit beta n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2U4_9FIRM
L3_060_256G1_scaffold_918_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23943..24350
DNA (408bp) protein (136aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2U5_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24571..25056
DNA (486bp) protein (162aa)
Membrane protease subunits, stomatin/prohibitin homologs n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBL4_9FIRM
Membrane protease subunits, stomatin/prohibitin homologs
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EDP22577.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_060_256G1_scaffold_918_26
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25073..25498
DNA (426bp) protein (142aa)
Membrane protease subunits stomatin/prohibitin homologs n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q4F6_9FIRM
Membrane protease subunits stomatin/prohibitin homologs {ECO:0000313|EMBL:CDC30615.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Membrane protease subunits, stomatin/prohibitin homologs
L3_060_256G1_scaffold_918_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25498..25698
DNA (201bp) protein (67aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Faecalibacterium RepID=D4K2U7_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK97840.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25765..26541
DNA (777bp) protein (259aa)
Predicted membrane protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2U8_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK97841.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26635..27735)
DNA (1101bp) protein (367aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2U9_9FIRM
Membrane-associated lipoprotein involved in thiamine biosynthesis
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:CBK97842.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_918_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27732..28151)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2V0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97843.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 86 in total

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