ggKbase home page

L3_060_256G1_scaffold_4652

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_4652_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(228..1625)
DNA (1398bp) protein (466aa)
Phage integrase family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JY05_9FIRM
Phage integrase family.
Phage integrase family {ECO:0000313|EMBL:CBK98904.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4652_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1638..1952)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22076.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_060_256G1_scaffold_4652_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2032..3279)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9P9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22075.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_060_256G1_scaffold_4652_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3769..3963)
DNA (195bp) protein (65aa)
Phage/plasmid primase, P4 family, C-terminal domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0C6_9FIRM
phage/plasmid primase, P4 family, C-terminal domain
Phage/plasmid primase, P4 family, C-terminal domain {ECO:0000313|EMBL:CBK99725.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4652_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4011..4916)
DNA (906bp) protein (302aa)
Phage/plasmid primase, P4 family, C-terminal domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JY03_9FIRM
phage/plasmid primase, P4 family, C-terminal domain
Phage/plasmid primase, P4 family, C-terminal domain {ECO:0000313|EMBL:CBK98902.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4652_6
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4909..5022)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HS91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO17578.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
L3_060_256G1_scaffold_4652_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5568..5807)
DNA (240bp) protein (80aa)
PTS HPr component phosphorylation site n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JY02_9FIRM
PTS HPr component phosphorylation site.
PTS HPr component phosphorylation site {ECO:0000313|EMBL:CBK98901.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4652_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5823..6791)
DNA (969bp) protein (323aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase, PfkB family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHR8_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EFQ07279.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_060_256G1_scaffold_4652_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6801..8183)
DNA (1383bp) protein (461aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JY00_9FIRM
sugar (Glycoside-Pentoside-Hexuronide) transporter
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CBK98899.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4652_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8217..8609)
DNA (393bp) protein (131aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:CBK98898.1}; EC=4.4.1.5 {ECO:0000313|EMBL:CBK98898.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXZ9_9FIRM
L3_060_256G1_scaffold_4652_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8606..9610)
DNA (1005bp) protein (335aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14)
Threonine dehydrogenase and related Zn-dependent dehydrogenases n=2 Tax=Faecalibacterium prausnitzii RepID=D4JXZ8_9FIRM
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EFQ07276.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_060_256G1_scaffold_4652_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9796..10956)
DNA (1161bp) protein (387aa)
ROK family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHK3_9FIRM
ROK family protein {ECO:0000313|EMBL:EFQ07342.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Transcriptional regulator/sugar kinase
L3_060_256G1_scaffold_4652_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11132..11380)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXZ6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98895.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4652_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11949..12365)
DNA (417bp) protein (139aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9W6_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDP22125.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Phage integrase family.
L3_060_256G1_scaffold_4652_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12431..13135)
DNA (705bp) protein (235aa)
Phage integrase family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXZ5_9FIRM
Phage integrase family.
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDP22263.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Displaying 15 items

View Taxonomy