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L3_060_256G1_scaffold_4872

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_4872_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(67..1437)
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4JZZ1_9FIRM
Domain of unknown function DUF87.
Uncharacterized protein {ECO:0000313|EMBL:CBK99590.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4872_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1462..1827)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06811.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_060_256G1_scaffold_4872_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1841..2758)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ32_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFQ06815.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_060_256G1_scaffold_4872_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3031..3474)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZY8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99587.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4872_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3452..3934)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06659.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_060_256G1_scaffold_4872_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4019..4234)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44649.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_060_256G1_scaffold_4872_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4376..5587)
DNA (1212bp) protein (404aa)
TraG/TraD family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3I2_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EEU97547.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Type IV secretory pathway, VirD4 components
L3_060_256G1_scaffold_4872_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5625..5960)
DNA (336bp) protein (112aa)
Uncharacterized protein (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05424.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Type IV secretory pathway, VirD4 components
L3_060_256G1_scaffold_4872_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5957..6427)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4K4N1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98474.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4872_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6524..6949)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZB4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99363.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4872_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7015..8049)
DNA (1035bp) protein (345aa)
ParB-like partition proteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZB3_9FIRM
ParB-like partition proteins
ParB-like partition proteins {ECO:0000313|EMBL:CBK99362.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4872_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8006..8416)
DNA (411bp) protein (137aa)
ATPases involved in chromosome partitioning n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZV6_9FIRM
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBK99555.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4872_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8440..8838)
DNA (399bp) protein (133aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMX4_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EFQ05430.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ATPases involved in chromosome partitioning
L3_060_256G1_scaffold_4872_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8838..9707)
DNA (870bp) protein (290aa)
Replication initiator protein A domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3G9_9FIRM
Replication initiator protein A domain protein {ECO:0000313|EMBL:EEU97534.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Replication initiator protein A (RepA) N-terminus.
L3_060_256G1_scaffold_4872_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10227..11564
DNA (1338bp) protein (446aa)
Trk-type K+ transport systems, membrane components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZB2_9FIRM
Trk-type K+ transport systems, membrane components
Trk-type K+ transport systems, membrane components {ECO:0000313|EMBL:CBK99361.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4872_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11576..12223
DNA (648bp) protein (216aa)
K+ transport systems, NAD-binding component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZB1_9FIRM
K+ transport systems, NAD-binding component
K+ transport systems, NAD-binding component {ECO:0000313|EMBL:CBK99360.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_4872_17
unknown

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12242..12370
DNA (129bp) protein (43aa)

This feature has no annotations

L3_060_256G1_scaffold_4872_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12413..14386
DNA (1974bp) protein (658aa)
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK99359.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Osmosensitive K+ channel histidine kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZB0_9FIRM
L3_060_256G1_scaffold_4872_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14379..15089
DNA (711bp) protein (237aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K5K0_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL02859.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_4872_20
unknown

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15267..15377
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 20 items

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