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L3_060_256G1_scaffold_1140

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_1140_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(173..1489)
DNA (1317bp) protein (439aa)
Sigma-54 interaction domain protein n=2 Tax=Bacteroides caccae RepID=A5ZK93_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17337.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L3_060_256G1_scaffold_1140_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1580..2419
DNA (840bp) protein (280aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bacteroides caccae RepID=A5ZK94_9BACE
L3_060_256G1_scaffold_1140_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2425..3657
DNA (1233bp) protein (411aa)
Peptidase M16 inactive domain protein n=3 Tax=Bacteroides RepID=A5ZK95_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72574.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted Zn-dependent peptidases
L3_060_256G1_scaffold_1140_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3654..5012
DNA (1359bp) protein (453aa)
MATE efflux family protein n=2 Tax=Bacteroides RepID=A5ZK96_9BACE
MATE efflux family protein {ECO:0000313|EMBL:CCZ72573.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative efflux protein, MATE family
L3_060_256G1_scaffold_1140_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5031..7322
DNA (2292bp) protein (764aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Bacteroides RepID=A5ZK97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72572.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Signal transduction histidine kinase
L3_060_256G1_scaffold_1140_6
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7485..11924
DNA (4440bp) protein (1480aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IH10_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI03453.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_060_256G1_scaffold_1140_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11927..14269
DNA (2343bp) protein (781aa)
Outer membrane protein, OMP85 family n=3 Tax=root RepID=A5ZKA0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17331.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_060_256G1_scaffold_1140_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14395..15306
DNA (912bp) protein (304aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZKA1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17330.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_060_256G1_scaffold_1140_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15449..17404
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EBR2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17329.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC transporter ATP-binding protein
L3_060_256G1_scaffold_1140_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17401..19461
DNA (2061bp) protein (687aa)
Peptidase family M13 {ECO:0000313|EMBL:EDM19591.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDM19591.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
endothelin-converting enzyme . Metallo peptidase. MEROPS family M13 (EC:3.4.24.- 3.4.24.71)
Peptidase family M13 n=2 Tax=Bacteroides caccae RepID=A5ZKA3_9BACE
L3_060_256G1_scaffold_1140_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19483..21135
DNA (1653bp) protein (551aa)
IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=2 Tax=root RepID=I8UWG9_9BACE
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_060_256G1_scaffold_1140_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21151..22173
DNA (1023bp) protein (341aa)
Cell shape determining protein, MreB/Mrl family n=4 Tax=root RepID=A5ZKA5_9BACE
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:EIY17326.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
rod shape-determining protein MreB
L3_060_256G1_scaffold_1140_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22192..23037
DNA (846bp) protein (282aa)
Cell shape-determining protein MreC n=3 Tax=Bacteroides RepID=A5ZKA6_9BACE
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
rod shape-determining protein MreC
L3_060_256G1_scaffold_1140_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23034..23531
DNA (498bp) protein (166aa)
Rod shape-determining protein MreD n=3 Tax=Bacteroides RepID=A5ZKA7_9BACE
Rod shape-determining protein MreD {ECO:0000313|EMBL:EIY17324.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_060_256G1_scaffold_1140_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23534..25396
DNA (1863bp) protein (621aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PM30_9BACE
Penicillin-binding protein 2 {ECO:0000313|EMBL:EIY17323.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_060_256G1_scaffold_1140_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25377..26834
DNA (1458bp) protein (486aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I8UWG4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17322.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Bacterial cell division membrane protein
L3_060_256G1_scaffold_1140_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26847..27275)
DNA (429bp) protein (143aa)
Gliding motility-associated lipoprotein GldH n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PLJ6_9BACE
Gliding motility-associated lipoprotein GldH {ECO:0000313|EMBL:EIY17321.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_060_256G1_scaffold_1140_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27304..28749)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UT15_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17320.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Uncharacterized homolog of PSP1
L3_060_256G1_scaffold_1140_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28764..29888)
DNA (1125bp) protein (375aa)
DNA polymerase III, gamma/tau subunits (EC:2.7.7.7)
DNA polymerase III, delta' subunit n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EBQ5_9BACE
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EIY17319.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_060_256G1_scaffold_1140_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29890..30843)
DNA (954bp) protein (318aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Methylenetetrahydrofolate reductase n=3 Tax=Bacteroides RepID=A5ZKB4_9BACE
5,10-methylenetetrahydrofolate reductase
L3_060_256G1_scaffold_1140_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31030..31542)
DNA (513bp) protein (171aa)
Ferritin-like protein n=3 Tax=Bacteroides RepID=A5ZKB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17317.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
Displaying 21 items

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