ggKbase home page

L3_060_256G1_scaffold_816

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_816_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(780..2033)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U8L2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16312.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L3_060_256G1_scaffold_816_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2191..4662
DNA (2472bp) protein (824aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Bacteroides caccae RepID=A5ZBW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16311.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Uncharacterized NAD(FAD)-dependent dehydrogenases
L3_060_256G1_scaffold_816_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4715..5050
DNA (336bp) protein (112aa)
Transcriptional regulator, MarR family n=3 Tax=Bacteroides RepID=A5ZBW5_9BACE
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ74466.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Transcriptional regulators
L3_060_256G1_scaffold_816_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5274..5909
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBW4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16309.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_060_256G1_scaffold_816_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5925..6551
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBW3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21982.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_060_256G1_scaffold_816_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6656..9667)
DNA (3012bp) protein (1004aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Beta-lactamase n=2 Tax=Bacteroides caccae RepID=A5ZBW2_9BACE
Beta-glucosidase-related glycosidases
L3_060_256G1_scaffold_816_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9664..10494)
DNA (831bp) protein (277aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases (EC:3.1.3.5)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PIV2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74462.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_060_256G1_scaffold_816_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10524..11309)
DNA (786bp) protein (262aa)
5'-nucleotidase, C-terminal domain protein n=3 Tax=Bacteroides RepID=A5ZBW0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74461.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
L3_060_256G1_scaffold_816_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


11467..11820
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=7 Tax=Bacteroides RepID=RL19_BACTN
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_060_256G1_scaffold_816_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11810..12001)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBV8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16303.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_060_256G1_scaffold_816_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12024..13004)
DNA (981bp) protein (327aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5U7L6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74108.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ROK family transcriptional repressor
L3_060_256G1_scaffold_816_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13184..13900
DNA (717bp) protein (239aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9PIU7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16301.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC transporter ATP-binding protein
L3_060_256G1_scaffold_816_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13931..15190
DNA (1260bp) protein (420aa)
Efflux ABC transporter, permease protein n=2 Tax=Bacteroides caccae RepID=A5ZBV5_9BACE
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDM21974.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ABC-type antimicrobial peptide transport system, permease component
L3_060_256G1_scaffold_816_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15195..15704
DNA (510bp) protein (170aa)
Efflux ABC transporter, permease protein n=3 Tax=Bacteroides RepID=A5ZBV4_9BACE
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDM21973.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ABC-type antimicrobial peptide transport system, permease component
L3_060_256G1_scaffold_816_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15710..16381
DNA (672bp) protein (224aa)
Efflux ABC transporter, permease protein n=3 Tax=Bacteroides RepID=A5ZBV4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74105.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ABC transporter ATP-binding protein
L3_060_256G1_scaffold_816_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16451..17551
DNA (1101bp) protein (367aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroides caccae RepID=A5ZBV3_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIY16298.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
RND family efflux transporter, MFP subunit
L3_060_256G1_scaffold_816_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17562..18899
DNA (1338bp) protein (446aa)
Outer membrane efflux protein n=2 Tax=Bacteroides caccae RepID=A5ZBV2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16297.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Outer membrane protein
L3_060_256G1_scaffold_816_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18981..19952
DNA (972bp) protein (324aa)
Methionine-R-sulfoxide reductase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PIU3_9BACE
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EIY16296.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
bifunctional methionine sulfoxide reductase A/B
L3_060_256G1_scaffold_816_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20042..22003
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UQ29_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16295.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
penicillin-binding protein
L3_060_256G1_scaffold_816_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22026..23153)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9E908_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16294.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_060_256G1_scaffold_816_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23168..23845)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PJ94_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16293.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_060_256G1_scaffold_816_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23871..24539)
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8UTI9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16292.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_060_256G1_scaffold_816_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24658..25218)
DNA (561bp) protein (187aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBU6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74096.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_060_256G1_scaffold_816_24
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25230..25436)
DNA (207bp) protein (69aa)
YitL protein n=3 Tax=Bacteroides RepID=C3QMI4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGM97009.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_060_256G1_scaffold_816_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25621..26622
DNA (1002bp) protein (334aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Lactate/malate dehydrogenase, NAD binding domain protein n=3 Tax=Bacteroides RepID=A5ZBU5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74095.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_060_256G1_scaffold_816_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26692..27123)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBU4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21963.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Fe2+/Zn2+ uptake regulation proteins
L3_060_256G1_scaffold_816_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27131..29077)
DNA (1947bp) protein (649aa)
Heavy metal translocating P-type ATPase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PJ90_9BACE
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIY16288.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
L3_060_256G1_scaffold_816_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29145..29801)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8UTI4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16287.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_060_256G1_scaffold_816_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30841..32673)
DNA (1833bp) protein (611aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PIT4_9BACE
L3_060_256G1_scaffold_816_30
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32673..33182)
DNA (510bp) protein (170aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QMJ1_9BACE
phosphoribosylaminoimidazole carboxylase
Displaying items 1-30 of 83 in total

View Taxonomy