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L3_060_256G1_scaffold_972

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_972_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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160..1347
DNA (1188bp) protein (396aa)
TraG family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU84_9CLOT
TraG family protein {ECO:0000313|EMBL:EEA80377.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Type IV secretory pathway, VirD4 components
L3_060_256G1_scaffold_972_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1379..1753
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80376.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_060_256G1_scaffold_972_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1842..2684
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15385.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_060_256G1_scaffold_972_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2689..3120
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80374.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_060_256G1_scaffold_972_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3124..3564
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80373.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_060_256G1_scaffold_972_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3551..5887
DNA (2337bp) protein (779aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63318.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Domain of unknown function DUF87.
L3_060_256G1_scaffold_972_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5887..6237
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80370.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_060_256G1_scaffold_972_8
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6267..7958
DNA (1692bp) protein (564aa)
CHAP domain n=1 Tax=Coprococcus catus GD/7 RepID=D4J5Y5_9FIRM
CHAP domain {ECO:0000313|EMBL:CBK79756.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
CHAP domain.
L3_060_256G1_scaffold_972_9
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8129..10390
DNA (2262bp) protein (754aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=D4J5Y6_9FIRM
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EEG94758.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Domain of unknown function (DUF1906)./Putative peptidoglycan binding domain.
L3_060_256G1_scaffold_972_10
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10471..11031
DNA (561bp) protein (187aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A6BGA3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK79758.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_060_256G1_scaffold_972_11
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11435..12148
DNA (714bp) protein (238aa)
Response regulator of the LytR/AlgR family n=1 Tax=Coprococcus catus GD/7 RepID=D4J5Y8_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK79759.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_060_256G1_scaffold_972_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12145..13419
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94762.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_060_256G1_scaffold_972_13
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13611..22967
DNA (9357bp) protein (3119aa)
RHS repeat-associated core domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGA0_9FIRM
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EDM63311.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Rhs family protein
L3_060_256G1_scaffold_972_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23034..23894
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94766.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_060_256G1_scaffold_972_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23912..24538
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94767.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_060_256G1_scaffold_972_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24866..25126
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93813.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Bacterial regulatory proteins, luxR family.
Displaying 16 items

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