ggKbase home page

L3_063_000G1_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_21_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1163)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I8Y3K3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY57715.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_063_000G1_scaffold_21_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1372..2547)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4W9J6_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF54739.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_000G1_scaffold_21_3
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2667..2768)
DNA (102bp) protein (34aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=I0PXV4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB57763.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_063_000G1_scaffold_21_4
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2768..3304)
DNA (537bp) protein (179aa)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Bacteroides RepID=C3QRB1_9BACE
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EEO54766.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
N-acetylmuramoyl-L-alanine amidase
L3_063_000G1_scaffold_21_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3406..3924)
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9AER8_9BACE
Putative DNA-binding protein {ECO:0000313|EMBL:EFF49674.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
non-specific DNA-binding protein
L3_063_000G1_scaffold_21_6
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4129..4995)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JIY7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB57766.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_063_000G1_scaffold_21_7
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5017..5418)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6K669_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB57767.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_063_000G1_scaffold_21_8
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5901..6614
DNA (714bp) protein (238aa)
Bacteriophage CI repressor protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QRA7_9BACE
Bacteriophage CI repressor protein {ECO:0000313|EMBL:EEO54762.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Peptidase S24-like./Bacteriophage CI repressor helix-turn-helix domain.
L3_063_000G1_scaffold_21_9
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6689..8062)
DNA (1374bp) protein (458aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=3 Tax=Bacteroides RepID=C3QRA6_9BACE
tRNA-i(6)A37 thiotransferase enzyme MiaB
L3_063_000G1_scaffold_21_10
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8309..8776
DNA (468bp) protein (156aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I8Y5A0_BACOV
hypothetical protein
Putative ferric siderophore transport system, periplasmic binding protein {ECO:0000313|EMBL:EFI39532.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_063_000G1_scaffold_21_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8911..10410
DNA (1500bp) protein (500aa)
Succinate CoA transferase {ECO:0000313|EMBL:EFF52293.1}; EC=2.8.3.- {ECO:0000313|EMBL:EFF52293.1};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Succinate CoA transferase n=4 Tax=Bacteroides RepID=D4WGP2_BACOV
succinate CoA transferases
L3_063_000G1_scaffold_21_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10645..12051)
DNA (1407bp) protein (469aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:EFF52294.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EFF52294.1};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family (EC:3.4.16.4 3.4.99.-)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Bacteroides RepID=D4WGP3_BACOV
L3_063_000G1_scaffold_21_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12208..13551)
DNA (1344bp) protein (448aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=2 Tax=Bacteroides RepID=D4WGP4_BACOV
L3_063_000G1_scaffold_21_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13565..13975)
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6J979_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN04874.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Protein of unknown function (DUF1200).
L3_063_000G1_scaffold_21_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14059..15471
DNA (1413bp) protein (471aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=7 Tax=Bacteroides RepID=A7LYH1_BACOV
L3_063_000G1_scaffold_21_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15468..15749
DNA (282bp) protein (94aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C3Q9S5_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN04872.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_063_000G1_scaffold_21_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16217..17275
DNA (1059bp) protein (353aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8Y7L4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY58297.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Predicted glycosylase
L3_063_000G1_scaffold_21_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17275..18537
DNA (1263bp) protein (421aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroides ovatus RepID=D4WMY6_BACOV
Major Facilitator Superfamily.
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFF50083.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_000G1_scaffold_21_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18554..20254
DNA (1701bp) protein (567aa)
Putative lipoprotein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WMY7_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF50084.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_000G1_scaffold_21_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20272..23340
DNA (3069bp) protein (1023aa)
TonB-dependent receptor n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WMY8_BACOV
TonB-dependent receptor {ECO:0000313|EMBL:EFF50085.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Outer membrane receptor for ferrienterochelin and colicins
L3_063_000G1_scaffold_21_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23365..24918
DNA (1554bp) protein (518aa)
Putative lipoprotein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WMY9_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF50086.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
SusD family.
L3_063_000G1_scaffold_21_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24978..26681
DNA (1704bp) protein (568aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WMZ0_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF50087.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
LamG domain-containing protein jellyroll fold domain-containing protein
L3_063_000G1_scaffold_21_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26800..30753
DNA (3954bp) protein (1318aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WMZ1_BACOV
Response regulator receiver domain protein {ECO:0000313|EMBL:EFF50088.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Signal transduction histidine kinase
L3_063_000G1_scaffold_21_24
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30884..31462)
DNA (579bp) protein (193aa)
Rubrerythrin n=4 Tax=Bacteroides RepID=C3QR90_9BACE
Rubrerythrin {ECO:0000313|EMBL:EEO54745.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Rubrerythrin
L3_063_000G1_scaffold_21_25
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31566..31724
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3QR89_9BACE
Conserved domain protein {ECO:0000313|EMBL:CDB57680.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_063_000G1_scaffold_21_26
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31711..33390
DNA (1680bp) protein (560aa)
Sulfate permease family protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JYG7_9BACE
Sulfate permease family protein {ECO:0000313|EMBL:EFI39516.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
high affinity sulphate transporter 1
L3_063_000G1_scaffold_21_27
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33591..36470)
DNA (2880bp) protein (960aa)
Alpha-N-acetylgalactosaminidase family protein n=4 Tax=Bacteroides RepID=C3QR87_9BACE
Alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:EFI39515.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
alpha-N-acetylgalactosaminidase
L3_063_000G1_scaffold_21_28
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36493..37626)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3QR86_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO54741.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
hypothetical protein
L3_063_000G1_scaffold_21_29
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37699..40023)
DNA (2325bp) protein (775aa)
N-acetyl-beta-hexosaminidase (EC:3.2.1.52)
Glycosyl hydrolase family 20 domain 2 n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JGA5_9BACE
Glycosyl hydrolase family 20 domain 2 {ECO:0000313|EMBL:CDB57684.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_063_000G1_scaffold_21_30
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40131..42023)
DNA (1893bp) protein (631aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6J8X7_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI39512.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
Displaying items 1-30 of 150 in total

View Taxonomy