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L3_063_000G1_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 187 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_47_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(107..1528)
DNA (1422bp) protein (474aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Pyruvate kinase n=7 Tax=Firmicutes RepID=E4LV14_9CLOT
pyk; pyruvate kinase
L3_063_000G1_scaffold_47_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1578..2540)
DNA (963bp) protein (321aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
6-phosphofructokinase n=7 Tax=Firmicutes RepID=E4LV15_9CLOT
6-phosphofructokinase
L3_063_000G1_scaffold_47_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2598..3512)
DNA (915bp) protein (305aa)
Primosomal protein DnaI n=7 Tax=Firmicutes RepID=E4LV16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85299.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
DNA replication protein
L3_063_000G1_scaffold_47_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3513..4709)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1ATJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84392.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
DnaD and phage-associated domain
L3_063_000G1_scaffold_47_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4714..5307)
DNA (594bp) protein (198aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=4 Tax=Firmicutes RepID=H1ATJ4_9FIRM
L3_063_000G1_scaffold_47_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5304..6134)
DNA (831bp) protein (277aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
formamidopyrimidine-DNA glycosylase (fpg) (EC:3.2.2.23 4.2.99.18)
Formamidopyrimidine-DNA glycosylase n=6 Tax=Firmicutes RepID=G1VMD0_9FIRM
L3_063_000G1_scaffold_47_7
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6143..8728)
DNA (2586bp) protein (862aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
DNA polymerase n=3 Tax=Erysipelotrichaceae RepID=H1ATJ6_9FIRM
polA; DNA polymerase I
L3_063_000G1_scaffold_47_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8834..9790)
DNA (957bp) protein (319aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATJ7_9FIRM
Periplasmic solute binding family protein {ECO:0000313|EMBL:EQJ58460.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC transporter metal-binding lipoprotein
L3_063_000G1_scaffold_47_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9903..10679)
DNA (777bp) protein (259aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATJ8_9FIRM
Peptidase M50 family protein {ECO:0000313|EMBL:EQJ58461.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
peptidase M50 family protein
L3_063_000G1_scaffold_47_10
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10666..11241)
DNA (576bp) protein (192aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LV23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85292.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_063_000G1_scaffold_47_11
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11549..12658)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LV24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84406.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_063_000G1_scaffold_47_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12919..13695)
DNA (777bp) protein (259aa)
Site-determining protein n=7 Tax=Firmicutes RepID=E4LV25_9CLOT
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
septum site-determining protein MinD
L3_063_000G1_scaffold_47_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13680..14246)
DNA (567bp) protein (189aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LV26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85289.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_063_000G1_scaffold_47_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14219..14773)
DNA (555bp) protein (185aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VMC2_9FIRM
Rod shape-determining protein MreD {ECO:0000313|EMBL:ENY85288.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
rod shape-determining protein MreD
L3_063_000G1_scaffold_47_15
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14776..15612)
DNA (837bp) protein (279aa)
Cell shape-determining protein MreC n=5 Tax=Firmicutes RepID=E4LV28_9CLOT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
rod shape-determining protein MreC
L3_063_000G1_scaffold_47_16
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15709..16398)
DNA (690bp) protein (230aa)
DNA repair protein RadC n=7 Tax=Firmicutes RepID=E4LV29_9CLOT
DNA repair protein RadC {ECO:0000313|EMBL:EHO20464.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
radC; DNA repair protein RadC
L3_063_000G1_scaffold_47_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16395..16799)
DNA (405bp) protein (135aa)
Sporulation and cell division repeat protein n=7 Tax=Firmicutes RepID=E4LV30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85285.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_063_000G1_scaffold_47_18
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17017..17610
DNA (594bp) protein (198aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LV31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37362.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_063_000G1_scaffold_47_19
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18196..18387)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BGW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20467.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_063_000G1_scaffold_47_20
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18982..19728)
DNA (747bp) protein (249aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84427.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
HisJ family histidinol phosphate phosphatase
L3_063_000G1_scaffold_47_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19774..20619)
DNA (846bp) protein (282aa)
EDD domain protein, DegV family n=5 Tax=Firmicutes RepID=E4LPH8_9CLOT
EDD, DegV family domain protein {ECO:0000313|EMBL:EQJ58475.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
EDD domain protein, DegV family
L3_063_000G1_scaffold_47_22
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21054..21356
DNA (303bp) protein (101aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1ATL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84431.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_063_000G1_scaffold_47_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21340..22938
DNA (1599bp) protein (533aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1ATL2_9FIRM
ABC1 family protein {ECO:0000313|EMBL:EQJ58477.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted unusual protein kinase
L3_063_000G1_scaffold_47_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23148..23873)
DNA (726bp) protein (242aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
NAD-dependent protein deacetylase n=5 Tax=Firmicutes RepID=E4LPI1_9CLOT
NAD-dependent deacetylase
L3_063_000G1_scaffold_47_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23879..26905)
DNA (3027bp) protein (1009aa)
Exonuclease SbcC n=3 Tax=Firmicutes RepID=H1ATL4_9FIRM
RecF/RecN/SMC N terminal domain protein {ECO:0000313|EMBL:EQJ58479.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
SMC domain-containing protein
L3_063_000G1_scaffold_47_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26895..28025)
DNA (1131bp) protein (377aa)
Exonuclease SbcCD, D subunit n=5 Tax=Firmicutes RepID=E4LPI3_9CLOT
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EQJ58480.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
nuclease SbcCD, D subunit
L3_063_000G1_scaffold_47_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28067..28834)
DNA (768bp) protein (256aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LPI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85275.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_063_000G1_scaffold_47_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29021..29857)
DNA (837bp) protein (279aa)
Lipoprotein n=5 Tax=Firmicutes RepID=E4LPI5_9CLOT
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L3_063_000G1_scaffold_47_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30028..30708)
DNA (681bp) protein (227aa)
ABC transporter, permease protein n=5 Tax=Firmicutes RepID=E4LPI6_9CLOT
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQJ58484.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
binding-protein-dependent transport system inner membrane protein
L3_063_000G1_scaffold_47_30
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30702..31736)
DNA (1035bp) protein (345aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ABC transporter, ATP-binding protein n=5 Tax=Firmicutes RepID=E4LPI7_9CLOT
ABC-type metal ion transport system, ATPase component
Displaying items 1-30 of 187 in total

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