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L3_063_000G1_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 160 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_72_1
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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142..1290
DNA (1149bp) protein (383aa)
NADH-dependent butanol dehydrogenase n=1 Tax=Treponema bryantii RepID=UPI0003B4A4E6
Butanol dehydrogenase {ECO:0000313|EMBL:EXM40428.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
iron-containing alcohol dehydrogenase
L3_063_000G1_scaffold_72_2
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1496..2287
DNA (792bp) protein (264aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XZC7_9FIRM
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDA20518.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_063_000G1_scaffold_72_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2361..3029
DNA (669bp) protein (223aa)
ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQH2_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFB75062.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
L3_063_000G1_scaffold_72_4
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3019..3765
DNA (747bp) protein (249aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EF75_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA88722.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
peptide ABC transporter ATP-binding protein
L3_063_000G1_scaffold_72_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4112..5260
DNA (1149bp) protein (383aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T877_PALPW
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ADQ80921.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
L3_063_000G1_scaffold_72_6
unknown

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5308..6030
DNA (723bp) protein (241aa)

This feature has no annotations

L3_063_000G1_scaffold_72_7
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(6064..6861)
DNA (798bp) protein (266aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Undecaprenyl-diphosphatase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F149_SPICH
UDP-diphosphatase
L3_063_000G1_scaffold_72_8
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7021..8115
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1I5_CLOCD
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_063_000G1_scaffold_72_9
unknown

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8257..9471
DNA (1215bp) protein (405aa)
UPI0003B35850 related cluster n=1 Tax=unknown RepID=UPI0003B35850
L3_063_000G1_scaffold_72_10
unknown

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9559..10014
DNA (456bp) protein (152aa)

This feature has no annotations

L3_063_000G1_scaffold_72_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10070..11506
DNA (1437bp) protein (479aa)
FAD-dependent oxidoreductase n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A7P9_CLOBO
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AEB77013.1}; TaxID=929506 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum BKT015925.;"
L3_063_000G1_scaffold_72_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11497..12750
DNA (1254bp) protein (418aa)
Thioredoxin reductase (EC:1.5.3.1)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27346.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_063_000G1_scaffold_72_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12753..13109
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037B6328
Molybdopterin oxidoreductase {ECO:0000313|EMBL:KJU72141.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_063_000G1_scaffold_72_14
Succinatimonas hippei, Succinatimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13154..14311)
DNA (1158bp) protein (386aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EFY07581.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EFY07581.1};; TaxID=762983 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Succinivibrionaceae; Succinatimonas.;" source="Succinatimonas hippei YIT 12066.;"
yugK; putative NADH-dependent butanol dehydrogenase 2 (EC:1.1.1.-)
Alcohol dehydrogenase, iron-dependent n=1 Tax=Succinatimonas hippei YIT 12066 RepID=E8LIP7_9GAMM
L3_063_000G1_scaffold_72_15
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14486..15124)
DNA (639bp) protein (213aa)
Alcohol dehydrogenase iron-dependent n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6QZK4_9FIRM
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDC38414.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
iron-containing alcohol dehydrogenase
L3_063_000G1_scaffold_72_16
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15137..15640)
DNA (504bp) protein (168aa)
yugK; putative NADH-dependent butanol dehydrogenase 2 (EC:1.1.1.-)
NADH-dependent butanol dehydrogenase n=1 Tax=Treponema bryantii RepID=UPI0003B4A4E6
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:CDC36055.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
L3_063_000G1_scaffold_72_17
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15893..16969
DNA (1077bp) protein (359aa)
DNA replication and repair protein RecF n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RECF_ALKOO
recF; recombination protein F
DNA replication and repair protein RecF {ECO:0000255|HAMAP-Rule:MF_00365}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L3_063_000G1_scaffold_72_18
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17137..17397
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VGE0_CLOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC67040.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_063_000G1_scaffold_72_19
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17399..19405
DNA (2007bp) protein (669aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|SAAS:SAAS00228809}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|SAAS:SAAS00048832};; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Caloramator australicus RC3 RepID=I7K917_9CLOT
L3_063_000G1_scaffold_72_20
unknown

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19434..19736
DNA (303bp) protein (101aa)

This feature has no annotations

L3_063_000G1_scaffold_72_21
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19775..22270
DNA (2496bp) protein (832aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AHA5_9CLOT
L3_063_000G1_scaffold_72_22
unknown

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22389..23321
DNA (933bp) protein (311aa)

This feature has no annotations

L3_063_000G1_scaffold_72_23
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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23414..24325
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium A2 RepID=R9KHT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45786.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Beta-lactamase class D
L3_063_000G1_scaffold_72_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24409..27498)
DNA (3090bp) protein (1030aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKR2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29964.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
L3_063_000G1_scaffold_72_25
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27741..28754
DNA (1014bp) protein (338aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9T4_9FIRM
metal ion ABC transporter ATPase
L3_063_000G1_scaffold_72_26
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28751..29419
DNA (669bp) protein (223aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RVZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86511.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
metI; D-methionine transport system permease protein MetI
L3_063_000G1_scaffold_72_27
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29459..30259
DNA (801bp) protein (267aa)
Lipoprotein n=1 Tax=Thermincola potens (strain JR) RepID=D5X9X7_THEPJ
NLPA lipoprotein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; Flags: Precursor;; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
L3_063_000G1_scaffold_72_28
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30350..31210
DNA (861bp) protein (287aa)
Polysaccharide deacetylase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGB2_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:EEG29507.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Predicted xylanase/chitin deacetylase
L3_063_000G1_scaffold_72_29
unknown

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comp(31244..31627)
DNA (384bp) protein (128aa)

This feature has no annotations

L3_063_000G1_scaffold_72_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31755..32555)
DNA (801bp) protein (267aa)
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:EEA83924.1}; EC=3.5.-.- {ECO:0000313|EMBL:EEA83924.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Delta-lactam-biosynthetic de-N-acetylase n=2 Tax=Clostridium RepID=B6FJ32_9CLOT
delta-lactam-biosynthetic de-N-acetylase
Displaying items 1-30 of 160 in total

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