ggKbase home page

L3_063_000G1_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_83_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

1..762
DNA (762bp) protein (254aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R0N2_9FIRM
L3_063_000G1_scaffold_83_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

793..2034
DNA (1242bp) protein (414aa)
Putative S-layer protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAR3_9FIRM
Putative S-layer protein {ECO:0000313|EMBL:CDC42409.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Transglutaminase-like superfamily.
L3_063_000G1_scaffold_83_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

2123..2617
DNA (495bp) protein (165aa)
Ribosome maturation factor RimP n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6V1_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_063_000G1_scaffold_83_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

2657..3844
DNA (1188bp) protein (396aa)
Transcription termination factor NusA n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R0N9_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
transcription elongation factor NusA
L3_063_000G1_scaffold_83_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

3854..4132
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42414.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted nucleic-acid-binding protein implicated in transcription termination
L3_063_000G1_scaffold_83_6
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4119..4433
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6N7W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79609.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Ribosomal protein HS6-type (S12/L30/L7a)
L3_063_000G1_scaffold_83_7
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4455..7253
DNA (2799bp) protein (933aa)
Translation initiation factor IF-2 n=2 Tax=Lachnospiraceae RepID=F3AD54_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
bacterial translation initiation factor 2 (bIF-2)
L3_063_000G1_scaffold_83_8
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7305..7700
DNA (396bp) protein (132aa)
Ribosome-binding factor A n=2 Tax=Lachnospiraceae RepID=F3AD53_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
ribosome-binding factor A
L3_063_000G1_scaffold_83_9
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7681..8649
DNA (969bp) protein (323aa)
DHHA1 domain protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LB27_BLAHA
DHHA1 domain protein {ECO:0000313|EMBL:EEX20662.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Exopolyphosphatase-related proteins
L3_063_000G1_scaffold_83_10
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8646..9569
DNA (924bp) protein (308aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12)
tRNA pseudouridine synthase B n=2 Tax=Lachnospiraceae RepID=C9LB26_BLAHA
L3_063_000G1_scaffold_83_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

9580..10497
DNA (918bp) protein (306aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R381_9FIRM
L3_063_000G1_scaffold_83_12
unknown

Not on your lists

10494..10637
DNA (144bp) protein (48aa)

This feature has no annotations

L3_063_000G1_scaffold_83_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

10698..11537
DNA (840bp) protein (280aa)
NlpC/P60 family protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6W3_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:CDC42422.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_063_000G1_scaffold_83_14
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11739..12155
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B2L2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ32948.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L3_063_000G1_scaffold_83_15
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12297..12563
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=3 Tax=Lachnospiraceae RepID=C9LB22_BLAHA
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
SSU ribosomal protein S15P
L3_063_000G1_scaffold_83_16
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12743..14836
DNA (2094bp) protein (698aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Lachnospiraceae RepID=F3AD46_9FIRM
L3_063_000G1_scaffold_83_17
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

14864..15814
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RKN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35346.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_063_000G1_scaffold_83_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

15821..16309
DNA (489bp) protein (163aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.97.1.4 1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHE6_9FIRM
L3_063_000G1_scaffold_83_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

16319..16837
DNA (519bp) protein (173aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42427.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_063_000G1_scaffold_83_20
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16973..18172
DNA (1200bp) protein (400aa)
Putative reductase BLAHAN_06623 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Uncharacterized paraquat-inducible protein B (EC:1.3.1.44)
Putative reductase BLAHAN_06623 n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LB18_BLAHA
L3_063_000G1_scaffold_83_21
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18233..18643)
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LB17_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC08095.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_063_000G1_scaffold_83_22
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18783..20357
DNA (1575bp) protein (525aa)
Voltage-gated chloride channel family protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NIB8_9FIRM
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:CDC08094.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Group I intron
L3_063_000G1_scaffold_83_23
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20380..22293
DNA (1914bp) protein (638aa)
Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=R6N7V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC08093.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_063_000G1_scaffold_83_24
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22245..22781
DNA (537bp) protein (179aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=R6PE72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC08092.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_063_000G1_scaffold_83_25
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22788..23789
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LB12_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX20647.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L3_063_000G1_scaffold_83_26
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23952..24908
DNA (957bp) protein (319aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NAD6_9FIRM
L3_063_000G1_scaffold_83_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24977..26479)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XSV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98671.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
mannitol dehydrogenase domain-containing protein
L3_063_000G1_scaffold_83_28
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(26509..27990)
DNA (1482bp) protein (494aa)
altronate dehydratase (EC:4.2.1.7)
altronate hydrolase n=1 Tax=Blautia producta RepID=UPI00038194C3
D-galactarate dehydratase {ECO:0000313|EMBL:CDC91992.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
L3_063_000G1_scaffold_83_29
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

28252..29250
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RCT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46693.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
LacI family transcriptional regulator
L3_063_000G1_scaffold_83_30
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

29281..30309
DNA (1029bp) protein (343aa)
TRAP transporter n=1 Tax=Blautia producta RepID=UPI00036561FE
Uncharacterized protein {ECO:0000313|EMBL:CDC91991.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
dctP; putative TRAP C4-dicarboxylate transport system DctP subunit
Displaying items 1-30 of 153 in total

View Taxonomy