ggKbase home page

L3_063_000G1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_106_1
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37..294)
DNA (258bp) protein (86aa)
HPr family phosphocarrier n=2 Tax=Lachnospiraceae RepID=S2Y9H4_9FIRM
HPr family phosphocarrier {ECO:0000313|EMBL:EPD60711.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
phosphotransferase system, phosphocarrier protein HPr
L3_063_000G1_scaffold_106_2
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(340..2298)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76083.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
PTS system protein
L3_063_000G1_scaffold_106_3
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2309..3229)
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Tagatose-6-phosphate kinase n=3 Tax=Lachnospiraceae RepID=F3AK86_9FIRM
hypothetical protein
L3_063_000G1_scaffold_106_4
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3230..3976)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YJ11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64306.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_063_000G1_scaffold_106_5
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4208..4903
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AK88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87210.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_000G1_scaffold_106_6
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5078..5338)
DNA (261bp) protein (87aa)
HPr family phosphocarrier n=2 Tax=Lachnospiraceae RepID=S2Y9H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87211.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
phosphotransferase system, phosphocarrier protein HPr
L3_063_000G1_scaffold_106_7
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5452..6381)
DNA (930bp) protein (310aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=2 Tax=Lachnospiraceae RepID=F3AK90_9FIRM
L3_063_000G1_scaffold_106_8
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6699..6899
DNA (201bp) protein (67aa)
Cold shock protein cspA n=4 Tax=Lachnospiraceae RepID=E9RRS4_9FIRM
Cold shock protein cspA {ECO:0000313|EMBL:EGG87213.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
cspD1; cold-shock protein D1
L3_063_000G1_scaffold_106_9
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7072..8469)
DNA (1398bp) protein (466aa)
Aldehyde dehydrogenase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y886_9FIRM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_063_000G1_scaffold_106_10
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8466..8702)
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2YSY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64312.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L3_063_000G1_scaffold_106_11
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8925..13403)
DNA (4479bp) protein (1493aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
DNA polymerase III polC-type n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AK94_9FIRM
DNA polymerase III subunit alpha
L3_063_000G1_scaffold_106_12
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13422..14477)
DNA (1056bp) protein (352aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Lachnospiraceae RepID=E9RRS0_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L3_063_000G1_scaffold_106_13
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14557..15045)
DNA (489bp) protein (163aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=S2YQC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64315.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_063_000G1_scaffold_106_14
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15174..15872)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AK97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87219.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
DNA alkylation repair enzyme
L3_063_000G1_scaffold_106_15
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15889..17742)
DNA (1854bp) protein (618aa)
ATP-dependent DNA helicase RecQ n=2 Tax=Coprococcus RepID=S2YSX7_9FIRM
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EPD60697.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
ATP-dependent DNA helicase RecQ
L3_063_000G1_scaffold_106_16
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17835..18059
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2Y9G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64319.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_063_000G1_scaffold_106_17
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18077..18613)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87222.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_063_000G1_scaffold_106_18
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18675..19949)
DNA (1275bp) protein (425aa)
Cytosine deaminase and related metal-dependent hydrolases (EC:3.5.4.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87223.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_000G1_scaffold_106_19
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20437..20589)
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87224.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_000G1_scaffold_106_20
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20816..21415)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76065.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_063_000G1_scaffold_106_21
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21797..23527)
DNA (1731bp) protein (577aa)
M3 family oligoendopeptidase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y9F9_9FIRM
M3 family oligoendopeptidase {ECO:0000313|EMBL:EPD60691.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
oligoendopeptidase, M3 family protein
L3_063_000G1_scaffold_106_22
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23669..25054)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YEL7_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_063_000G1_scaffold_106_23
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25045..25704)
DNA (660bp) protein (220aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RRQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76054.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
multidrug ABC transporter
L3_063_000G1_scaffold_106_24
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25707..26456)
DNA (750bp) protein (250aa)
MutG family lantibiotic protection ABC transporter permease subunit n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z2X7_9FIRM
MutG family lantibiotic protection ABC transporter permease subunit {ECO:0000313|EMBL:EPD64327.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
putative bacteriocin ABC transporter permease subunit
L3_063_000G1_scaffold_106_25
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26457..27206)
DNA (750bp) protein (250aa)
MutE/EpiE family lantibiotic protection ABC transporter permease subunit n=2 Tax=Lachnospiraceae RepID=S2YSW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87230.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
transporter protein
L3_063_000G1_scaffold_106_26
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27212..27913)
DNA (702bp) protein (234aa)
Lantibiotic protection ABC transporter, ATP-binding subunit n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZKA4_9FIRM
Lantibiotic protection ABC transporter, ATP-binding subunit {ECO:0000313|EMBL:EPD64329.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
spaF; lantibiotic transport ATP-binding protein spaF/mutF
L3_063_000G1_scaffold_106_27
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28180..28575
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RRP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76050.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_063_000G1_scaffold_106_28
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28649..29218
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76049.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
TetR family transcriptional regulator
L3_063_000G1_scaffold_106_29
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29323..29748
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87234.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_063_000G1_scaffold_106_30
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29791..30246
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2ZKA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87235.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
Displaying items 1-30 of 146 in total

View Taxonomy