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L3_063_000G1_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_112_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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125..508
DNA (384bp) protein (128aa)
Putative stress response protein n=16 Tax=Escherichia coli RepID=N2FH00_ECOLX
yjaA; hypothetical protein
Putative stress response protein {ECO:0000313|EMBL:KDU50638.1}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C1.;"
L3_063_000G1_scaffold_112_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(512..952)
DNA (441bp) protein (147aa)
Acetyltransferase, GNAT family n=8 Tax=Escherichia coli RepID=I2S9H3_ECOLX
yjaB; hypothetical protein
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ESD00755.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
L3_063_000G1_scaffold_112_3
Trabulsiella guamensis, Trabulsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1108..2037
DNA (930bp) protein (310aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1005994 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Trabulsiella.;" source="Trabulsiella guamensis ATCC 49490.;"
Homoserine O-succinyltransferase n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2SA26_ENTAL
Homoserine O-succinyltransferase
L3_063_000G1_scaffold_112_4
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2306..3907
DNA (1602bp) protein (534aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
Malate synthase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ANB9_CITK8
malate synthase
L3_063_000G1_scaffold_112_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4064..5368
DNA (1305bp) protein (435aa)
Isocitrate lyase n=7 Tax=Citrobacter RepID=J0LT11_9ENTR
Isocitrate lyase {ECO:0000313|EMBL:BAO18579.1}; Flags: Fragment;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
isocitrate lyase
L3_063_000G1_scaffold_112_6
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5495..7237
DNA (1743bp) protein (581aa)
Isocitrate dehydrogenase kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063056}; Short=IDH kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747};; Short=IDHK/P {ECO:0000256|HAMAP-Rule:MF_00747};; EC=2.7.11.5 {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063055};; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063053};; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
aceK; isocitrate dehydrogenase (EC:2.7.11.5 3.1.3.-)
bifunctional isocitrate dehydrogenase kinase/phosphatase n=1 Tax=Enterobacter cloacae RepID=UPI00030EF29A
L3_063_000G1_scaffold_112_7
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7244..7657)
DNA (414bp) protein (138aa)
ASCH domain protein n=2 Tax=Klebsiella RepID=J6IQR0_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWF78212.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
L3_063_000G1_scaffold_112_8
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7650..8483)
DNA (834bp) protein (278aa)
Acetate operon repressor n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IQN8_9ENTR
IclR protein {ECO:0000313|EMBL:KIS45102.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
IclR family transcriptional regulator
L3_063_000G1_scaffold_112_9
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8677..12360
DNA (3684bp) protein (1228aa)
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:KFD00692.1}; EC=2.1.1.10 {ECO:0000313|EMBL:KFD00692.1};; EC=2.1.1.13 {ECO:0000313|EMBL:KFD00692.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Methionine synthase n=1 Tax=Enterobacter sp. MGH 25 RepID=V3Q5X5_9ENTR
methionine synthase
L3_063_000G1_scaffold_112_10
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12884..14167
DNA (1284bp) protein (428aa)
Serine transporter SdaC n=1 Tax=Klebsiella sp. OBRC7 RepID=J5Y1U5_9ENTR
Serine transporter
Serine transporter {ECO:0000313|EMBL:AFN32478.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
L3_063_000G1_scaffold_112_11
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14231..15598
DNA (1368bp) protein (456aa)
L-serine dehydratase 1 n=4 Tax=Klebsiella oxytoca RepID=H3LNB4_KLEOX
L-serine dehydratase 1 {ECO:0000313|EMBL:EHS96946.1}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5245.;"
L-serine dehydratase
L3_063_000G1_scaffold_112_12
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15676..16116)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3MX35_KLEOX
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AID90261.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
L3_063_000G1_scaffold_112_13
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16415..16861
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VNK1_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN86684.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_000G1_scaffold_112_14
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17022..18653
DNA (1632bp) protein (544aa)
Sodium-dependent inorganic phosphate (Pi) transporter family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QVJ5_9ENTR
Membrane protein {ECO:0000313|EMBL:KDE33793.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
membrane protein
L3_063_000G1_scaffold_112_15
unknown

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18625..18855
DNA (231bp) protein (77aa)

This feature has no annotations

L3_063_000G1_scaffold_112_16
Enterobacter lignolyticus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18828..19706
DNA (879bp) protein (293aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=701347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter lignolyticus (strain SCF1).;"
Pseudouridine synthase n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G2G0_ENTLS
pseudouridine synthase
L3_063_000G1_scaffold_112_17
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19703..19975)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Escherichia sp. TW11588 RepID=UPI0002BA9E87
Enterobacter aerogenes strain DDE1 c48, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30764.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_000G1_scaffold_112_18
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20143..21084)
DNA (942bp) protein (314aa)
Sodium-dependent transporter n=1 Tax=Cronobacter sakazakii 680 RepID=K8DJW8_CROSK
Bile acid:sodium symporter {ECO:0000313|EMBL:KGY18153.1}; Na+-dependent transporter {ECO:0000313|EMBL:CDZ85428.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
hypothetical protein
L3_063_000G1_scaffold_112_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21206..22786)
DNA (1581bp) protein (527aa)
Sigma-54 dependent transcriptional regulator RtcR n=3 Tax=Citrobacter RepID=J0LSZ6_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC06276.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulatory protein RtcR
L3_063_000G1_scaffold_112_20
Cronobacter dublinensis, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23246..24370
DNA (1125bp) protein (375aa)
Membrane protease subunits,stomatin/prohibitin homologs n=1 Tax=Cronobacter dublinensis 582 RepID=K8BDH6_9ENTR
Membrane protease subunits,stomatin/prohibitin homologs {ECO:0000313|EMBL:CCJ86407.1}; TaxID=1208661 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter dublinensis 582.;"
hypothetical protein
L3_063_000G1_scaffold_112_21
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24375..25601
DNA (1227bp) protein (409aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
RNA-splicing ligase RtcB n=1 Tax=Enterobacter cloacae S611 RepID=V5B1W4_ENTCL
RTCB protein
L3_063_000G1_scaffold_112_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25607..26398
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D2T2_CITFR
Putative nucleotidyltransferase family protein {ECO:0000313|EMBL:KEL78309.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L3_063_000G1_scaffold_112_23
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26490..27851)
DNA (1362bp) protein (454aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IQP6_9ENTR
L3_063_000G1_scaffold_112_24
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28405..30051
DNA (1647bp) protein (549aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35730.;"
UPI0002F39E9E related cluster n=1 Tax=unknown RepID=UPI0002F39E9E
L3_063_000G1_scaffold_112_25
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30440..30682
DNA (243bp) protein (81aa)
Uncharacterized protein n=3 Tax=Salmonella choleraesuis RepID=H7EFF8_SALHO
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CBG90429.1}; Flags: Precursor;; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
L3_063_000G1_scaffold_112_26
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30748..31386
DNA (639bp) protein (213aa)
Group 4 capsule polysaccharide formation lipogfcB family protein n=1 Tax=Enterobacter cloacae S611 RepID=V5B2G7_ENTCL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAL46966.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L3_063_000G1_scaffold_112_27
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31383..32123
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QVK5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDE33804.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L3_063_000G1_scaffold_112_28
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32123..34219
DNA (2097bp) protein (699aa)
Lipoprotein n=4 Tax=Enterobacter cloacae complex RepID=V3Q3W8_9ENTR
Membrane protein {ECO:0000313|EMBL:KEY51716.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
membrane protein
L3_063_000G1_scaffold_112_29
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34293..34751)
DNA (459bp) protein (153aa)
Bacterial transferase hexapeptide family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QEA4_9ENTR
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase {ECO:0000313|EMBL:KDE33806.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
L3_063_000G1_scaffold_112_30
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34761..35273)
DNA (513bp) protein (171aa)
Acetyltransferase family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IRZ5_9ENTR
Acetyltransferase family protein {ECO:0000313|EMBL:EJI89754.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
GNAT family acetyltransferase
Displaying items 1-30 of 141 in total

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