ggKbase home page

L3_063_000G1_scaffold_148

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_148_1
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(396..647)
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZBY3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ84395.1}; Flags: Fragment;; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_063_000G1_scaffold_148_2
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(667..1704)
DNA (1038bp) protein (346aa)
GroES-like protein n=4 Tax=Bacteroides RepID=D2F004_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE01533.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
zinc-type alcohol dehydrogenase
L3_063_000G1_scaffold_148_3
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1731..2528)
DNA (798bp) protein (266aa)
SpoU rRNA methylase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VE04_9BACE
SpoU rRNA methylase {ECO:0000313|EMBL:EFV24994.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
rRNA methylase
L3_063_000G1_scaffold_148_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2580..5267)
DNA (2688bp) protein (896aa)
Transglutaminase-like protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7VAK9_BACUN
Transglutaminase-like protein {ECO:0000313|EMBL:EDO52086.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
transglutaminase
L3_063_000G1_scaffold_148_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5319..5732)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=A7VAL0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO52087.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_063_000G1_scaffold_148_6
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5759..7660)
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EGJ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE01491.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
TonB-dependent receptor plug
L3_063_000G1_scaffold_148_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7823..8713)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I4F7_BACUN
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDO52090.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
response regulator receiver protein
L3_063_000G1_scaffold_148_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9183..9557)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7VAM3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:KDS50673.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_063_000G1_scaffold_148_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9595..10671)
DNA (1077bp) protein (359aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=3 Tax=Bacteroides RepID=D2EZY9_9BACE
L3_063_000G1_scaffold_148_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10733..12079)
DNA (1347bp) protein (449aa)
MATE efflux family protein n=2 Tax=root RepID=A7VAM5_BACUN
MATE efflux family protein {ECO:0000313|EMBL:EDO52102.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
MATE efflux family protein
L3_063_000G1_scaffold_148_11
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12303..13391)
DNA (1089bp) protein (363aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
2-aminoethylphosphonate--pyruvate aminotransferase (EC:2.6.1.37)
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VDY8_9BACE
L3_063_000G1_scaffold_148_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13428..14222)
DNA (795bp) protein (265aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
Phosphonoacetaldehyde hydrolase (EC:3.11.1.1)
Phosphonoacetaldehyde hydrolase n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7VAM8_BACUN
L3_063_000G1_scaffold_148_13
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14237..15694)
DNA (1458bp) protein (486aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VDY6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV24976.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_063_000G1_scaffold_148_14
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15807..16688
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PS68_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF57522.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_063_000G1_scaffold_148_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16786..18726
DNA (1941bp) protein (647aa)
Cadmium-exporting ATPase {ECO:0000313|EMBL:EDO52109.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EDO52109.1};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
Cadmium-exporting ATPase n=3 Tax=Bacteroides RepID=A7VAN2_BACUN
heavy metal translocating P-type ATPase
L3_063_000G1_scaffold_148_16
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18732..19166
DNA (435bp) protein (145aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7VAN3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE01462.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_063_000G1_scaffold_148_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19238..20878
DNA (1641bp) protein (547aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HW75_BACUN
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS50679.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
RNA polymerase ECF-type sigma factor
L3_063_000G1_scaffold_148_18
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20960..21757
DNA (798bp) protein (266aa)
Methyltransferase domain protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EGP6_9BACE
Methyltransferase domain protein {ECO:0000313|EMBL:CDE01458.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
3-demethylubiquinone-9 3-methyltransferase
L3_063_000G1_scaffold_148_19
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21957..22442)
DNA (486bp) protein (162aa)
DNA-binding helix-turn-helix protein n=4 Tax=Bacteroides RepID=A7VAN6_BACUN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFA19451.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_063_000G1_scaffold_148_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23865..26693
DNA (2829bp) protein (943aa)
Glycosyl hydrolase family 3 C-terminal domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EZX1_9BACE
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:KDS50683.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
glycoside hydrolase 3
L3_063_000G1_scaffold_148_21
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26808..27914
DNA (1107bp) protein (369aa)
6-phosphogluconolactonase (EC:3.1.1.31)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7VAP0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV24958.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_063_000G1_scaffold_148_22
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27985..29034
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EZW9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA19437.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_063_000G1_scaffold_148_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29042..29395)
DNA (354bp) protein (118aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7VAP2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82843.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_063_000G1_scaffold_148_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29415..30806)
DNA (1392bp) protein (464aa)
Transporter, major facilitator family protein n=3 Tax=root RepID=A7VAP3_BACUN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDO52120.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
major facilitator superfamily MFS_1
L3_063_000G1_scaffold_148_25
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30960..31349)
DNA (390bp) protein (130aa)
Preprotein translocase, SecG subunit n=3 Tax=root RepID=D2EZW6_9BACE
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EFA19434.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
protein translocase subunit SecG
L3_063_000G1_scaffold_148_26
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31370..32008)
DNA (639bp) protein (213aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7VAP6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV24953.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_063_000G1_scaffold_148_27
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32013..32537)
DNA (525bp) protein (175aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7VAP7_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE01440.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L3_063_000G1_scaffold_148_28
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32524..33774)
DNA (1251bp) protein (417aa)
Sigma-54 interaction domain protein n=6 Tax=Bacteroides RepID=A7VAP8_BACUN
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EDO52125.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
transcriptional regulator
L3_063_000G1_scaffold_148_29
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33776..34873)
DNA (1098bp) protein (366aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=5 Tax=Bacteroides RepID=A7VAP9_BACUN
putative 4-hydroxythreonine-4-phosphate dehydrogenase
L3_063_000G1_scaffold_148_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34879..35934)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7VAQ0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO52127.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
Displaying items 1-30 of 135 in total

View Taxonomy