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L3_063_000G1_scaffold_174

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_174_1
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(294..2093)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YS35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64930.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_063_000G1_scaffold_174_2
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2112..2444)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZLZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64929.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Predicted pyrophosphatase
L3_063_000G1_scaffold_174_3
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2540..3430)
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RUS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75047.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_063_000G1_scaffold_174_4
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3790..3957)
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Y5V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86082.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_063_000G1_scaffold_174_5
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4409..5164)
DNA (756bp) protein (252aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21 3.6.3.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RUS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75050.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_063_000G1_scaffold_174_6
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5177..5824)
DNA (648bp) protein (216aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YKC0_9FIRM
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EPD64923.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L3_063_000G1_scaffold_174_7
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5883..6713)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z6B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59619.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_063_000G1_scaffold_174_8
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6900..7286)
DNA (387bp) protein (129aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Mutator mutT protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YBJ6_9FIRM
Mutator mutT protein {ECO:0000313|EMBL:EPD59620.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_063_000G1_scaffold_174_9
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7406..9355)
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RUT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75054.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
DNA or RNA helicases of superfamily II
L3_063_000G1_scaffold_174_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9642..11171)
DNA (1530bp) protein (510aa)
LlaJI restriction endonuclease n=1 Tax=Clostridium sp. L2-50 RepID=A7VF18_9CLOT
Type II restriction-modification system restriction subunit
Type II restriction-modification system restriction subunit {ECO:0000313|EMBL:CCO04003.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_063_000G1_scaffold_174_11
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11173..12750)
DNA (1578bp) protein (526aa)
Type II restriction-modification system restriction subunit (EC:3.1.21.3)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium sp. L2-50 RepID=A7VF17_9CLOT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EDO57768.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_063_000G1_scaffold_174_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12755..14539)
DNA (1785bp) protein (595aa)
Cytosine-specific methyltransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M3_9FIRM
DNA-methyltransferase (dcm)
DNA-methyltransferase (Dcm) {ECO:0000313|EMBL:CBL27583.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_063_000G1_scaffold_174_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14532..14762)
DNA (231bp) protein (77aa)
Predicted transcriptional regulator n=1 Tax=Roseburia sp. CAG:309 RepID=R6YUX5_9FIRM
Predicted transcriptional regulator {ECO:0000313|EMBL:CDD35219.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Predicted transcriptional regulator
L3_063_000G1_scaffold_174_14
unknown

Not on your lists

comp(15015..15167)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_063_000G1_scaffold_174_15
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15190..16773)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZF33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62589.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
MobA/MobL family.
L3_063_000G1_scaffold_174_16
unknown

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comp(16931..17065)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_063_000G1_scaffold_174_17
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17116..18492)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YK33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62590.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Predicted P-loop ATPase and inactivated derivatives
L3_063_000G1_scaffold_174_18
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18431..19108)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XIB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18947.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
DNA primase (bacterial type)
L3_063_000G1_scaffold_174_19
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19180..20727)
DNA (1548bp) protein (516aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K8A5_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CDB67334.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_063_000G1_scaffold_174_20
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20720..22408)
DNA (1689bp) protein (563aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Eubacterium sp. CAG:252 RepID=R6JWZ7_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CDB67333.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_063_000G1_scaffold_174_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22419..24044)
DNA (1626bp) protein (542aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KV00_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL11190.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_063_000G1_scaffold_174_22
unknown

Not on your lists

comp(24060..24335)
DNA (276bp) protein (92aa)

This feature has no annotations

L3_063_000G1_scaffold_174_23
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24789..25607
DNA (819bp) protein (273aa)
Putative transcriptional regulator n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5ATY7_EUBCE
Putative transcriptional regulator {ECO:0000313|EMBL:EIM57260.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
Predicted transcriptional regulators
L3_063_000G1_scaffold_174_24
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25791..26318)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D294_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74360.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L3_063_000G1_scaffold_174_25
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26448..26645)
DNA (198bp) protein (66aa)
Predicted transcriptional regulator n=1 Tax=Dorea sp. CAG:105 RepID=R5DEM5_9FIRM
Predicted transcriptional regulator {ECO:0000313|EMBL:CCX74361.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Predicted transcriptional regulator
L3_063_000G1_scaffold_174_26
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26758..27606)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RUT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75054.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
DNA or RNA helicases of superfamily II
L3_063_000G1_scaffold_174_27
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27733..27936)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RUT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75055.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_063_000G1_scaffold_174_28
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28230..29150)
DNA (921bp) protein (307aa)
Elongation factor Ts n=2 Tax=Lachnospiraceae RepID=F3AKS2_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
translation elongation factor Ts (EF-Ts)
L3_063_000G1_scaffold_174_29
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29230..29982)
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=4 Tax=Lachnospiraceae RepID=E9RUT6_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
SSU ribosomal protein S2P
L3_063_000G1_scaffold_174_30
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30250..30765)
DNA (516bp) protein (172aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
DUTP diphosphatase n=3 Tax=Lachnospiraceae RepID=S2Y5X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86090.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Displaying items 1-30 of 119 in total

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