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L3_063_000G1_scaffold_178

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Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_178_1
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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226..1965
DNA (1740bp) protein (580aa)
Fibronectin-binding protein A domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NB54_CLOSV
Fibronectin-binding protein A domain protein {ECO:0000313|EMBL:EDS08362.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted RNA-binding protein homologous to eukaryotic snRNP
L3_063_000G1_scaffold_178_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2203..2577
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NB55_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36412.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_178_3
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2765..4054)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NB57_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08365.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted ATPase (AAA+ superfamily)
L3_063_000G1_scaffold_178_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4067..5197)
DNA (1131bp) protein (377aa)
Prephenate dehydratase (EC:4.2.1.51)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5CYK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36414.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_063_000G1_scaffold_178_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5325..5666
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NB60_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36415.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_178_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5726..6262
DNA (537bp) protein (179aa)
Nitroreductase family protein n=2 Tax=Clostridiales RepID=B0NB61_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36416.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Nitroreductase
L3_063_000G1_scaffold_178_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6275..7192
DNA (918bp) protein (306aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=2 Tax=Clostridiales RepID=F7KUA8_9FIRM
L3_063_000G1_scaffold_178_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7207..7647
DNA (441bp) protein (147aa)
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein n=2 Tax=Clostridiales RepID=B0NB63_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36418.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Aspartate carbamoyltransferase, regulatory subunit
L3_063_000G1_scaffold_178_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8171..8650)
DNA (480bp) protein (160aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Ribonuclease HI (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NB64_CLOSV
L3_063_000G1_scaffold_178_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8655..9353)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36420.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_178_11
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9357..9827)
DNA (471bp) protein (157aa)
mog; molybdopterin adenylyltransferase Mog (EC:2.7.7.75)
Molybdopterin binding domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NB66_CLOSV
Molybdopterin binding domain protein {ECO:0000313|EMBL:EDS08374.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_063_000G1_scaffold_178_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9879..10556)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36422.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
LrgB family protein
L3_063_000G1_scaffold_178_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10549..10935)
DNA (387bp) protein (129aa)
LrgA family protein n=2 Tax=Clostridiales RepID=B0NB68_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36423.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
LrgA family protein
L3_063_000G1_scaffold_178_14
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11102..12574)
DNA (1473bp) protein (491aa)
Stage IV sporulation protein A n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NB69_CLOSV
Stage IV sporulation protein A {ECO:0000313|EMBL:EDS08377.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
stage IV sporulation protein A
L3_063_000G1_scaffold_178_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12755..13516
DNA (762bp) protein (254aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=2 Tax=Clostridiales RepID=B0NB70_CLOSV
L3_063_000G1_scaffold_178_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13527..14975)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NB71_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36426.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_178_17
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15074..16351)
DNA (1278bp) protein (426aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NB72_CLOSV
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDS08380.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_063_000G1_scaffold_178_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16404..17279)
DNA (876bp) protein (292aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=2 Tax=Clostridiales RepID=B0NB73_CLOSV
L3_063_000G1_scaffold_178_19
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17297..19222)
DNA (1926bp) protein (642aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36429.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_063_000G1_scaffold_178_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19288..20127)
DNA (840bp) protein (280aa)
AP endonuclease, family 2 n=2 Tax=Clostridiales RepID=B0NB75_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36430.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_178_21
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20329..21216
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=2 Tax=Clostridiales RepID=B0NB77_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36431.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
LysR family transcriptional regulator
L3_063_000G1_scaffold_178_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21297..22310)
DNA (1014bp) protein (338aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=2 Tax=Clostridiales RepID=B0NB78_CLOSV
L3_063_000G1_scaffold_178_23
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22339..22980)
DNA (642bp) protein (214aa)
Glycerol-3-phosphate acyltransferase n=2 Tax=Clostridiales RepID=B0NB79_CLOSV
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L3_063_000G1_scaffold_178_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22983..24311)
DNA (1329bp) protein (443aa)
GTPase Der n=2 Tax=Clostridiales RepID=B0NB80_CLOSV
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ribosome-associated GTPase EngA
L3_063_000G1_scaffold_178_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24466..25641
DNA (1176bp) protein (392aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=2 Tax=Clostridiales RepID=B0NB81_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36435.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_063_000G1_scaffold_178_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25986..27428)
DNA (1443bp) protein (481aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36436.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted xylanase/chitin deacetylase
L3_063_000G1_scaffold_178_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27552..28715)
DNA (1164bp) protein (388aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=2 Tax=Clostridiales RepID=B0NB84_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36437.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_063_000G1_scaffold_178_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28718..29800)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=2 Tax=Clostridiales RepID=B0NB85_CLOSV
L3_063_000G1_scaffold_178_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29828..31507)
DNA (1680bp) protein (560aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NB86_CLOSV
L3_063_000G1_scaffold_178_30
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31531..33201)
DNA (1671bp) protein (557aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=2 Tax=Clostridiales RepID=B0NB87_CLOSV
Displaying items 1-30 of 114 in total

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