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L3_063_000G1_scaffold_195

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_195_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(821..1342)
DNA (522bp) protein (174aa)
Nuclease-like protein {ECO:0000313|EMBL:EES36264.1}; EC=3.1.31.1 {ECO:0000313|EMBL:EES36264.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
nucH; thermonuclease (EC:3.1.31.1)
Thermonuclease n=6 Tax=Staphylococcus epidermidis RepID=F3TQU0_STAEP
L3_063_000G1_scaffold_195_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1501..1710
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QWT6_STAEP
Membrane protein {ECO:0000313|EMBL:ESV19348.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
L3_063_000G1_scaffold_195_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1879..2481)
DNA (603bp) protein (201aa)
Two-component response regulator n=44 Tax=Staphylococcus epidermidis RepID=Q8CPD7_STAES
two-component response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:EFE59385.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_063_000G1_scaffold_195_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2478..3572)
DNA (1095bp) protein (365aa)
Histidine kinase n=8 Tax=Staphylococcus epidermidis RepID=F9LHH6_STAEP
Histidine kinase {ECO:0000313|EMBL:ESV19346.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
histidine kinase family protein
L3_063_000G1_scaffold_195_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3572..4303)
DNA (732bp) protein (244aa)
Uncharacterized protein n=14 Tax=Staphylococcus epidermidis RepID=Q8CSQ9_STAES
hypothetical protein
ABC-2 type transporter {ECO:0000313|EMBL:EES36260.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L3_063_000G1_scaffold_195_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4306..4968)
DNA (663bp) protein (221aa)
ABC transporter, ATP-binding protein n=8 Tax=Staphylococcus epidermidis RepID=F9LHH8_STAEP
ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ11540.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_063_000G1_scaffold_195_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5354..6826)
DNA (1473bp) protein (491aa)
Cardiolipin synthase 1 {ECO:0000255|HAMAP-Rule:MF_01916}; Short=CL synthase 1 {ECO:0000255|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000255|HAMAP-Rule:MF_01916};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Cardiolipin synthase 1 n=14 Tax=Staphylococcus epidermidis RepID=CLS1_STAES
cardiolipin synthetase-like protein
L3_063_000G1_scaffold_195_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6884..7081)
DNA (198bp) protein (66aa)
Uncharacterized protein n=56 Tax=Staphylococcus epidermidis RepID=Q5HPM6_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59390.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_063_000G1_scaffold_195_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7395..8420
DNA (1026bp) protein (342aa)
Low-specificity L-threonine aldolase (EC:4.1.2.5)
Uncharacterized protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HPM7_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:AAW54230.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_063_000G1_scaffold_195_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8490..9173
DNA (684bp) protein (228aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=Q8CSR3_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ11536.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_063_000G1_scaffold_195_11
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9424..9612)
DNA (189bp) protein (63aa)
Uncharacterized protein n=13 Tax=Staphylococcus epidermidis RepID=Q8CSR4_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ11535.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_063_000G1_scaffold_195_12
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9619..9996)
DNA (378bp) protein (126aa)
Uncharacterized protein n=19 Tax=Staphylococcus epidermidis RepID=Q8CSR5_STAES
phi 11 orf33 homolog [SA bacteriophages 11,Mu50B]
Uncharacterized protein {ECO:0000313|EMBL:ETJ11534.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_063_000G1_scaffold_195_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10173..10364)
DNA (192bp) protein (64aa)
Uncharacterized protein n=19 Tax=Staphylococcus epidermidis RepID=Q5HPM9_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54228.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_063_000G1_scaffold_195_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10370..11716)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=16 Tax=Staphylococcus epidermidis RepID=Q5HPN0_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54220.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_063_000G1_scaffold_195_15

Not on your lists

comp(11781..12020)
DNA (240bp) protein (80aa)
Portal protein, truncation n=20 Tax=Staphylococcus epidermidis RepID=Q5HPN1_STAEQ
Portal protein, truncation
Phage portal protein gp6-like protein {ECO:0000313|EMBL:ETJ37304.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_063_000G1_scaffold_195_16

Not on your lists

12161..12406
DNA (246bp) protein (82aa)
Integrase XerD family protein n=8 Tax=Staphylococcus epidermidis RepID=Q8CPE0_STAES
integrase XerD family protein
Phage integrase family protein {ECO:0000313|EMBL:ETJ16273.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_063_000G1_scaffold_195_17

Not on your lists

comp(12600..13940)
DNA (1341bp) protein (447aa)
Glutamine synthetase n=75 Tax=Staphylococcus epidermidis RepID=GLNA_STAEQ
glutamine-ammonia ligase
Glutamine synthetase {ECO:0000313|EMBL:ETJ16274.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_063_000G1_scaffold_195_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13959..14324)
DNA (366bp) protein (122aa)
Glutamine synthetase repressor n=75 Tax=Staphylococcus epidermidis RepID=Q5HPN3_STAEQ
glnR; glutamine synthetase repressor
MerR family transcriptional regulator {ECO:0000313|EMBL:ESV19336.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L3_063_000G1_scaffold_195_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14807..16045)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=19 Tax=Staphylococcus RepID=Q5HPN4_STAEQ
Aluminum resistance protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54281.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_063_000G1_scaffold_195_20
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16061..17302)
DNA (1242bp) protein (414aa)
GTPase HflX n=23 Tax=Staphylococcus epidermidis RepID=D1WNW9_STAEP
GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_063_000G1_scaffold_195_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17412..17888
DNA (477bp) protein (159aa)
Glutathione peroxidase homolog BsaA; EC=1.-.-.-;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Glutathione peroxidase homolog BsaA n=15 Tax=Staphylococcus epidermidis RepID=BSAA_STAES
Glutathione peroxidase family protein
L3_063_000G1_scaffold_195_22
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18110..18349)
DNA (240bp) protein (80aa)
RNA-binding protein Hfq n=70 Tax=Staphylococcus epidermidis RepID=Q5HPN7_STAEQ
host factor-I protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_063_000G1_scaffold_195_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18303..19301)
DNA (999bp) protein (333aa)
miaA; tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
tRNA dimethylallyltransferase n=41 Tax=Staphylococcus epidermidis RepID=MIAA_STAEQ
L3_063_000G1_scaffold_195_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19313..20239)
DNA (927bp) protein (309aa)
Lysophospholipase ; Monoglyceride lipase ; putative (EC:3.1.1.5)
Hydrolase, alpha/beta hydrolase fold family n=15 Tax=Staphylococcus epidermidis RepID=Q5HPN9_STAEQ
Hydrolase, alpha/beta hydrolase fold family {ECO:0000313|EMBL:AAW54268.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_063_000G1_scaffold_195_25
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20463..22136)
DNA (1674bp) protein (558aa)
Aerobic glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Aerobic glycerol-3-phosphate dehydrogenase n=19 Tax=Staphylococcus epidermidis RepID=GLPD_STAEQ
L3_063_000G1_scaffold_195_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22313..23812)
DNA (1500bp) protein (500aa)
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase {ECO:0000255|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000255|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000255|HAMAP-Rule:MF_00186}; Short=GK {ECO:0000255|HAMAP-Rule:MF_00186};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Glycerol kinase n=19 Tax=Staphylococcus epidermidis RepID=GLPK_STAEQ
L3_063_000G1_scaffold_195_27
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23966..24790)
DNA (825bp) protein (275aa)
Glycerol uptake facilitator n=46 Tax=Staphylococcus epidermidis RepID=Q8CPE7_STAES
Glycerol uptake facilitator protein
Glycerol uptake facilitator {ECO:0000313|EMBL:ETJ10827.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_063_000G1_scaffold_195_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25165..25698)
DNA (534bp) protein (178aa)
Glycerol uptake operon antiterminator regulatory protein n=17 Tax=Staphylococcus epidermidis RepID=Q5HPP3_STAEQ
Glycerol uptake operon antiterminator regulatory protein
Glycerol uptake operon antiterminator regulatory protein {ECO:0000256|PIRNR:PIRNR016897}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_063_000G1_scaffold_195_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25712..27649)
DNA (1938bp) protein (646aa)
DNA mismatch repair protein MutL n=15 Tax=Staphylococcus epidermidis RepID=MUTL_STAEQ
DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000255|HAMAP-Rule:MF_00149}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L3_063_000G1_scaffold_195_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27664..30285)
DNA (2622bp) protein (874aa)
DNA mismatch repair protein MutS n=13 Tax=Staphylococcus epidermidis RepID=MUTS_STAEQ
hexA; DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000255|HAMAP-Rule:MF_00096}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Displaying items 1-30 of 104 in total

View Taxonomy